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PLM0_60_b1_sep16_scaffold_1313

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM0_60_b1_sep16_scaffold_1313_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(2..145)
DNA (144bp) protein (48aa)
Putative pilin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W7_GEMAT
African swine fever virus j13L
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM0_60_b1_sep16_scaffold_1313_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(365..1738)
DNA (1374bp) protein (458aa)
NtrC family two-component response regulator Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9W9_GEMAT
NtrC family two-component response regulator
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH39567.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_1313_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1735..2991)
DNA (1257bp) protein (419aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X0_GEMAT
PAS sensor protein
PLM0_60_b1_sep16_scaffold_1313_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

3232..4596
DNA (1365bp) protein (455aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9X1_GEMAT
protein of unknown function DUF21
Uncharacterized protein {ECO:0000313|EMBL:AHG91526.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_5
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

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comp(4593..7016)
DNA (2424bp) protein (808aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1Z1K8_9BACT
o-antigen polymerase
Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
PLM0_60_b1_sep16_scaffold_1313_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7020..7736)
DNA (717bp) protein (239aa)
phospholipase Tax=Hymenobacter norwichensis RepID=UPI0003B4AF55
Esterase/lipase
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM0_60_b1_sep16_scaffold_1313_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7818..8633
DNA (816bp) protein (272aa)
Peptidase M48 family protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAY9_GEMAT
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:AHG91371.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_8
unknown

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comp(8642..9295)
DNA (654bp) protein (218aa)

This feature has no annotations

PLM0_60_b1_sep16_scaffold_1313_9
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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9507..10910
DNA (1404bp) protein (468aa)
Peptidase M20 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHQ0_KORVE
peptidase M20
Tax=RBG_16_Acidobacteria_68_9_curated
PLM0_60_b1_sep16_scaffold_1313_10
RBG_13_Actinobacteria_63_9_curated, Rubrobacteria, Actinobacteria, Bacteria

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comp(11274..11399)
DNA (126bp) protein (42aa)
Cold shock protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Q1_GEMAT
Cold-shock protein DNA-binding protein
Tax=RBG_13_Actinobacteria_63_9_curated
PLM0_60_b1_sep16_scaffold_1313_11
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11638..12513)
DNA (876bp) protein (292aa)
Conserved uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q092B4_STIAD
Uncharacterized protein {ECO:0000313|EMBL:KFE68055.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
PLM0_60_b1_sep16_scaffold_1313_12
CSP1_5_NC10, NC10, Bacteria

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12725..13657
DNA (933bp) protein (311aa)
phenazine biosynthesis protein PhzF family protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
phenazine biosynthesis protein PhzF family
Tax=CSP1_5_NC10
PLM0_60_b1_sep16_scaffold_1313_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13696..14022)
DNA (327bp) protein (109aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA56_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91761.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14216..15028)
DNA (813bp) protein (271aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036B2DF0
Protein of unknown function (DUF2807)
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM0_60_b1_sep16_scaffold_1313_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

15266..15526
DNA (261bp) protein (87aa)
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM0_60_b1_sep16_scaffold_1313_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

15536..15880
DNA (345bp) protein (115aa)
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
Tax=GWC2_Gemmatimonadetes_71_10_curated
PLM0_60_b1_sep16_scaffold_1313_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15950..16468)
DNA (519bp) protein (173aa)
Thioredoxin Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
Redoxin domain protein
Redoxin domain protein {ECO:0000313|EMBL:AHG89253.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16504..17220)
DNA (717bp) protein (239aa)
Thiol--disulfide interchange protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
cytochrome c biogenesis protein transmembrane region
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AHG89254.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17295..18047)
DNA (753bp) protein (251aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI1_GEMAT
PBS lyase HEAT domain protein repeat-containing protein
PBS lyase HEAT domain protein repeat-containing protein {ECO:0000313|EMBL:AHG87842.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(18044..19519)
DNA (1476bp) protein (492aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI2_GEMAT
hypothetical protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM0_60_b1_sep16_scaffold_1313_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19530..20378)
DNA (849bp) protein (283aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG87844.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20375..20950)
DNA (576bp) protein (192aa)
RNA polymerase ECF-type sigma factor Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABI4_GEMAT
RNA polymerase sigma factor, sigma-70 family
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG87845.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_23
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21163..22137
DNA (975bp) protein (325aa)
Aldo/keto reductase family oxidoreductase Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CHL7_MYXFH
Aldo/keto reductase {ECO:0000313|EMBL:AKF81520.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus 124B02.;"
aldo/keto reductase family oxidoreductase
PLM0_60_b1_sep16_scaffold_1313_24
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22186..22602
DNA (417bp) protein (139aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA92_GEMAT
hypothetical membrane protein
Hypothetical membrane protein {ECO:0000313|EMBL:BAH39690.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM0_60_b1_sep16_scaffold_1313_25
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(22609..23583)
DNA (975bp) protein (325aa)
protein of unknown function DUF1906
Uncharacterized protein {ECO:0000313|EMBL:AHG92036.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_26
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

24010..24924
DNA (915bp) protein (305aa)
hypothetical protein Tax=Stenotrophomonas maltophilia RepID=UPI00031DAF55
NLP/P60 protein
NLP/P60 protein {ECO:0000313|EMBL:AHG87807.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM0_60_b1_sep16_scaffold_1313_27
unknown

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24921..25157
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 27 items

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