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PLM3_60_b1_sep16_scaffold_3575

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3575_1
unknown

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comp(1..228)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3575_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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511..828
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG43_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_3575_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(906..2069)
DNA (1164bp) protein (388aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ54_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43291.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_3575_4
RBG_13_Chloroflexi_50_21_curated, Chloroflexi, Bacteria

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comp(2141..2641)
DNA (501bp) protein (167aa)
mgsA; methylglyoxal synthase (EC:4.2.3.3)
Methylglyoxal synthase Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YU92_9CHLB bin=RBG9 species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=RBG9 organism_group=Chloroflexi
Tax=RBG_13_Chloroflexi_50_21_curated
PLM3_60_b1_sep16_scaffold_3575_5
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2838..3227)
DNA (390bp) protein (130aa)
DoxX family protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G6S7_GEOUR
DoxX family protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM3_60_b1_sep16_scaffold_3575_6
Holospora elegans, Holospora, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3462..4223
DNA (762bp) protein (254aa)
general substrate transporter Tax=Holospora undulata RepID=UPI00033032BD
Proline/betaine transporter {ECO:0000313|EMBL:GAJ46175.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Holosporaceae; Holospora.;" source="Holospora elegans E1.;"
major facilitator family transporter
PLM3_60_b1_sep16_scaffold_3575_7
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4178..4744
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Labrenzia RepID=U7GM68_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ERP98597.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
general substrate transporter
PLM3_60_b1_sep16_scaffold_3575_8
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4902..5315
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Methyloglobulus morosus KoM1 RepID=V5C6X4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KDR43212.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
Hypothetical protein
PLM3_60_b1_sep16_scaffold_3575_9
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5402..5788)
DNA (387bp) protein (129aa)
DoxX family protein; K15977 putative oxidoreductase bin=bin5_DeltaP species=Geobacter daltonii genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
DoxX family protein
Tax=CSP1_8_Deltaproteobacteria
PLM3_60_b1_sep16_scaffold_3575_10
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6052..6441
DNA (390bp) protein (130aa)
Putative uncharacterized protein Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CR67_SIDLE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
PLM3_60_b1_sep16_scaffold_3575_11
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6488..7711)
DNA (1224bp) protein (408aa)
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_b1_sep16_scaffold_3575_12
unknown

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comp(7744..8103)
DNA (360bp) protein (120aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3575_13
GWC2_Geobacteraceae_58_44_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8130..9554
DNA (1425bp) protein (475aa)
Tetratricopeptide TPR_2 repeat protein bin=GWA2_Deltaproteo_65_63 species=Sideroxydans lithotrophicus genus=Sideroxydans taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Geobacteraceae_58_44_curated
PLM3_60_b1_sep16_scaffold_3575_14
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(9563..10204)
DNA (642bp) protein (214aa)
serine-type D-Ala-D-Ala carboxypeptidase (EC:3.4.16.4); K07258 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6) [EC:3.4.16.4] bin=bin3_NC10 species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin3_NC10 organism_group=NC10
putative d-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Tax=CSP1_5_NC10
Displaying 14 items

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