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PLM3_60_b1_sep16_scaffold_8109

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_8109_1
unknown

Not on your lists

comp(2..268)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8109_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(280..1098)
DNA (819bp) protein (273aa)
Sterol desaturase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C5E3_DESTA
sterol desaturase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8109_3
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1160..1486)
DNA (327bp) protein (109aa)
Putative uncharacterized protein Tax=Acidovorax sp. NO-1 RepID=H0BVF2_9BURK
type 12 methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_60_b1_sep16_scaffold_8109_4
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1628..2437)
DNA (810bp) protein (270aa)
UbiE/COQ5 methyltransferase Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q125G9_POLSJ
UbiE/COQ5 methyltransferase
UbiE/COQ5 methyltransferase {ECO:0000313|EMBL:ABE45823.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
PLM3_60_b1_sep16_scaffold_8109_5
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2559..2846)
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Caulobacter sp. (strain K31) RepID=B0SV77_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ72967.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
PLM3_60_b1_sep16_scaffold_8109_6
Nitrosomonas sp. AL212, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2968..3741)
DNA (774bp) protein (258aa)
hypothetical protein Tax=Methylosarcina fibrata RepID=UPI00036A1E02
CarD family transcriptional regulator
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ADZ27654.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. AL212.;"
PLM3_60_b1_sep16_scaffold_8109_7
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(4014..5036)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Paenisporosarcina sp. TG20 RepID=UPI00031EA047
sqrE; Sulfide:quinone oxidoreductase SqrE
Tax=RBG_16_Archaea_50_20_curated
PLM3_60_b1_sep16_scaffold_8109_8
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5064..5342)
DNA (279bp) protein (93aa)
Putative uncharacterized protein Tax=gamma proteobacterium IMCC3088 RepID=F3L5D7_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGG28454.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_8109_9
unknown

Not on your lists

comp(6168..6416)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8109_10
unknown

Not on your lists

comp(6434..6988)
DNA (555bp) protein (185aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8109_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7047..8486
DNA (1440bp) protein (480aa)
rsmB; ribosomal RNA small subunit methyltransferase B (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase B Tax=Candidatus Nitrospira defluvii RepID=D8PAB4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8109_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

8483..9187
DNA (705bp) protein (235aa)
rpe; d-ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase Tax=Candidatus Nitrospira defluvii RepID=D8PAB5_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_8109_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

9196..9534
DNA (339bp) protein (113aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit Tax=Candidatus Nitrospira defluvii RepID=D8PAB6_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_8109_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


9573..10778
DNA (1206bp) protein (402aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit Tax=Candidatus Nitrospira defluvii RepID=D8PAB6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8109_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists


10801..12087
DNA (1287bp) protein (429aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanyl-tRNA synthetase, beta subunit Tax=Candidatus Nitrospira defluvii RepID=D8PAB7_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 15 items

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