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PLM3_60_b1_sep16_scaffold_8725

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_8725_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(114..680)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P904_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_8725_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(783..1241)
DNA (459bp) protein (153aa)
dtd; d-tyrosyl-tRNA(Tyr) deacylase (EC:3.1.-.-)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160974}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160970};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
D-tyrosyl-tRNA(Tyr) deacylase Tax=Candidatus Nitrospira defluvii RepID=D8P905_9BACT
PLM3_60_b1_sep16_scaffold_8725_3
unknown

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comp(1276..1797)
DNA (522bp) protein (174aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8725_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(1832..3448)
DNA (1617bp) protein (539aa)
Virulence factor MviN homolog Tax=Candidatus Nitrospira defluvii RepID=D8P907_9BACT
mviN; virulence factor MviN-like protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8725_5
unknown

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comp(3542..3799)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8725_6
unknown

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comp(3792..3941)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8725_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4059..4208
DNA (150bp) protein (50aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PDI4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41293.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_8725_8
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

4209..4697
DNA (489bp) protein (163aa)
Putative uncharacterized protein Tax=Roseiflexus sp. (strain RS-1) RepID=A5USU9_ROSS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ89702.1}; species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
PLM3_60_b1_sep16_scaffold_8725_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5013..6764
DNA (1752bp) protein (584aa)
General secretion pathway protein E, contains GAF domain Tax=Candidatus Nitrospira defluvii RepID=B3U4T7_9BACT
gspE2; general secretion pathway protein E
General secretion pathway protein E, contains GAF domain {ECO:0000313|EMBL:CBK41248.1}; Type II secretion system protein E {ECO:0000313|EMBL:ACE75654.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_8725_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(6779..7465)
DNA (687bp) protein (229aa)
xthA; exodeoxyribonuclease III (EC:3.1.11.2)
Exodeoxyribonuclease III {ECO:0000313|EMBL:CBK43995.1}; EC=3.1.11.2 {ECO:0000313|EMBL:CBK43995.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Exodeoxyribonuclease III Tax=Candidatus Nitrospira defluvii RepID=D8P913_9BACT
PLM3_60_b1_sep16_scaffold_8725_11
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7539..8252)
DNA (714bp) protein (238aa)
hypothetical protein Tax=Woodsholea maritima RepID=UPI000367A255
Uncharacterized protein {ECO:0000313|EMBL:ETX08432.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_8725_12
RBG_16_Deltaproteobacteria_54_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8264..8761)
DNA (498bp) protein (166aa)
Uncharacterized protein bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_54_11_curated
PLM3_60_b1_sep16_scaffold_8725_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(8812..9351)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P912_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_8725_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9409..10002)
DNA (594bp) protein (198aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P915_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_8725_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10059..10424)
DNA (366bp) protein (122aa)
putative carboxylesterase (EC:3.1.1.1)
Putative Carboxylesterase Tax=Candidatus Nitrospira defluvii RepID=D8P960_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 15 items

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