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PLM3_60_b1_sep16_scaffold_11701

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_11701_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(1..138)
DNA (138bp) protein (46aa)
50S ribosomal protein L25 Tax=Candidatus Nitrospira defluvii RepID=D8PBE0_9BACT
rplY; 50S ribosomal protein L25
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(274..1215)
DNA (942bp) protein (314aa)
prsA; ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase Tax=Candidatus Nitrospira defluvii RepID=D8PBD9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1383..2204)
DNA (822bp) protein (274aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase Tax=Candidatus Nitrospira defluvii RepID=D8PBD8_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_4
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3062..3295
DNA (234bp) protein (78aa)
Uncharacterized protein Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08Z68_STIAD
Uncharacterized protein {ECO:0000313|EMBL:EAU65788.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_11701_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3688..5157)
DNA (1470bp) protein (490aa)
putative sensor protein PilS (EC:2.7.13.3)
Putative Sensor protein PilS Tax=Candidatus Nitrospira defluvii RepID=D8PBD6_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_11701_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5567..6787)
DNA (1221bp) protein (407aa)
Type IV pilus biogenesis protein PilC Tax=Candidatus Nitrospira defluvii RepID=D8PBD5_9BACT
pilC; type IV pilus biogenesis protein PilC
Type IV pilus biogenesis protein PilC {ECO:0000313|EMBL:CBK40544.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_11701_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7155..7802)
DNA (648bp) protein (216aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PBD3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

7855..8178
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBD2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8235..8561)
DNA (327bp) protein (109aa)
Putative Esterase, beta-lactamase family Tax=Candidatus Nitrospira defluvii RepID=D8PBD1_9BACT
putative esterase, beta-lactamase family
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8501..9334)
DNA (834bp) protein (278aa)
Putative Esterase, beta-lactamase family Tax=Candidatus Nitrospira defluvii RepID=D8PBD1_9BACT
putative esterase, beta-lactamase family
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_11701_11
unknown

Not on your lists

comp(9405..9521)
DNA (117bp) protein (39aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_11701_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9518..10045)
DNA (528bp) protein (176aa)
Putative Cell division protein DivIVA Tax=Candidatus Nitrospira defluvii RepID=D8PBD0_9BACT
putative cell division protein DivIVA
Putative Cell division protein DivIVA {ECO:0000313|EMBL:CBK40539.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_11701_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10068..10364)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBC9_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40538.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_11701_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10364..10651)
DNA (288bp) protein (96aa)
proC; pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase Tax=Candidatus Nitrospira defluvii RepID=D8PBC8_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 14 items

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