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PLM3_60_b1_sep16_scaffold_461

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_461_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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97..636
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIG8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43055.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_461_2
unknown

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comp(644..790)
DNA (147bp) protein (49aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_461_3
RLO_RIF02_62_27, RIF2, Bacteria

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895..1557
DNA (663bp) protein (221aa)
Ubiquinone/menaquinone biosynthesis methyltransferase UbiE Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R494_HALMT
ubiquinone/menaquinone biosynthesis methyltransferase UbiE
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_60_b1_sep16_scaffold_461_4
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1698..2762
DNA (1065bp) protein (355aa)
Threonine dehydrogenase Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U3C7_9DELT
Threonine dehydrogenase {ECO:0000313|EMBL:ERK89378.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus sp. (contaminant ex DSM 436).;"
adh; alcohol dehydrogenase
PLM3_60_b1_sep16_scaffold_461_5
R_Nitrospirae_66_17, Nitrospirae, Bacteria

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3160..4788
DNA (1629bp) protein (543aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBK0_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3_60_b1_sep16_scaffold_461_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5499..6455)
DNA (957bp) protein (319aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase Tax=Candidatus Nitrospira defluvii RepID=D8PIG6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_461_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(6491..7213)
DNA (723bp) protein (241aa)
Putative peptidase M50 Tax=Leptospirillum ferrodiazotrophum RepID=C6HTP8_9BACT
Zn-dependent protease
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_461_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(7221..9191)
DNA (1971bp) protein (657aa)
Branched chain amino acid ABC transporter substrate-binding protein Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXH4_9BACT
putative extracellular ligand-binding receptor
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_461_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9357..10349
DNA (993bp) protein (331aa)
Tyrosine recombinase XerC Tax=uncultured bacterium A1Q1_fos_560 RepID=L7W0U9_9BACT
xerD; tyrosine recombinase XerD
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_461_trna_1
unknown

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10423..10495
DNA (73bp)
transferRNA Val
PLM3_60_b1_sep16_scaffold_461_trna_2
unknown

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10629..10704
DNA (76bp)
transferRNA Asp
PLM3_60_b1_sep16_scaffold_461_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10801..11505
DNA (705bp) protein (235aa)
Protein TolQ Tax=Candidatus Nitrospira defluvii RepID=D8PIG3_9BACT
tolQ; protein TolQ
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_461_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

11502..11960
DNA (459bp) protein (153aa)
Protein TolR Tax=Candidatus Nitrospira defluvii RepID=D8PIG2_9BACT
tolR; protein TolR
Protein TolR {ECO:0000313|EMBL:CBK43049.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_461_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12024..12959
DNA (936bp) protein (312aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIG1_9BACT
putative protein TolA
Uncharacterized protein {ECO:0000313|EMBL:CBK43048.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_461_13

Not on your lists

12965..14269
DNA (1305bp) protein (435aa)
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins Tax=uncultured bacterium A1Q1_fos_560 RepID=L7VXH2_9BACT
tolB; protein TolB
TolB protein, periplasmic protein involved in the tonb-independent uptake of group A colicins {ECO:0000313|EMBL:AGC72141.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium A1Q1_fos_560.;"
PLM3_60_b1_sep16_scaffold_461_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14323..14970
DNA (648bp) protein (216aa)
Peptidoglycan-associated lipoprotein Pal (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8PIF9_9BACT
pal; peptidoglycan-associated lipoprotein pal
Peptidoglycan-associated lipoprotein Pal (Modular protein) {ECO:0000313|EMBL:CBK43046.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_461_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14976..16079
DNA (1104bp) protein (368aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 17 items

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