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PLM3_60_b1_sep16_scaffold_520

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_520_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1..756)
DNA (756bp) protein (252aa)
Diaminopimelate epimerase bin=GWC2_Nitrospirae-rel_56_14 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diaminopimelate epimerase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(753..2015)
DNA (1263bp) protein (421aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase Tax=Candidatus Nitrospira defluvii RepID=D8PAK4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(2008..3888)
DNA (1881bp) protein (627aa)
hypothetical protein Tax=candidate division OP9 bacterium OP9-cSCG RepID=UPI000369EA3D
Fe-S oxidoreductase
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_520_4
unknown

Not on your lists

comp(4006..4350)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_520_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4353..5792)
DNA (1440bp) protein (480aa)
argH; argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase Tax=Candidatus Nitrospira defluvii RepID=D8PAK2_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5842..7056)
DNA (1215bp) protein (405aa)
argG; argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PAK1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7075..8073)
DNA (999bp) protein (333aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
Ornithine carbamoyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PAK0_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8085..9278)
DNA (1194bp) protein (398aa)
argD; acetylornithine aminotransferase (EC:2.6.1.11)
Acetylornithine aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PAJ9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9555..10064
DNA (510bp) protein (170aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAJ8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40257.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_520_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10078..10923)
DNA (846bp) protein (282aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAJ5_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_520_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11390..11995
DNA (606bp) protein (202aa)
gpmA; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase Tax=Candidatus Nitrospira defluvii RepID=D8PAJ4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12009..12509)
DNA (501bp) protein (167aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAJ3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12940..13497
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAJ2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40251.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_520_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13604..14143)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PGC1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_15
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(14307..14912)
DNA (606bp) protein (202aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_b1_sep16_scaffold_520_16
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(15222..16124)
DNA (903bp) protein (301aa)
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase Tax=Candidatus Nitrospira defluvii RepID=D8PAJ0_9BACT
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3_60_b1_sep16_scaffold_520_17
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

comp(16121..17197)
DNA (1077bp) protein (359aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAI9_9BACT
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
PLM3_60_b1_sep16_scaffold_520_18
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17897..18346
DNA (450bp) protein (150aa)
Uncharacterized protein Tax=Cylindrospermum stagnale PCC 7417 RepID=K9X330_9NOST
Uncharacterized protein {ECO:0000313|EMBL:ETX01075.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
secreted protein
PLM3_60_b1_sep16_scaffold_520_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18411..19958)
DNA (1548bp) protein (516aa)
Fis family transcriptional regulator bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_520_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

20485..22134
DNA (1650bp) protein (550aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAR1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 20 items

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