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PLM3_60_b1_sep16_scaffold_812

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_812_1
unknown

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_812_2
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(164..1456)
DNA (1293bp) protein (431aa)
UPI0003D6926E related cluster Tax=unknown RepID=UPI0003D6926E
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI24390.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
PLM3_60_b1_sep16_scaffold_812_3
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1453..2448)
DNA (996bp) protein (332aa)
Methyltransferase type 11 bin=GWC2_Proteo_65_14_Ab886 species=unknown genus=Sulfurospirillum taxon_order=Campylobacterales taxon_class=Epsilonproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hypothetical protein
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM3_60_b1_sep16_scaffold_812_4
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(2455..3396)
DNA (942bp) protein (314aa)
Methylase involved in ubiquinone/menaquinone biosynthesis Tax=Halosarcina pallida JCM 14848 RepID=M0DHL9_9EURY
methyltransferase
Tax=GWC2_RIF_CHLX_73_18_curated
PLM3_60_b1_sep16_scaffold_812_5
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3407..4660)
DNA (1254bp) protein (418aa)
Lipopolysaccharide transport system ATP-binding protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HM47_9BRAD
ABC transporter related protein
Tax=RBG_13_Planctomycetes_63_9_curated
PLM3_60_b1_sep16_scaffold_812_6
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

comp(4660..5484)
DNA (825bp) protein (275aa)
Abc-2 transporter, putative Tax=Sulfobacillus acidophilus RepID=F8I3Y9_SULAT
ABC transporter
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_60_b1_sep16_scaffold_812_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5563..7554)
DNA (1992bp) protein (664aa)
asnB; asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
asparagine synthase Tax=Geovibrio thiophilus RepID=UPI0003B5C870
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_812_8
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

Not on your lists

comp(7554..8468)
DNA (915bp) protein (305aa)
NAD_dependent epimerase/dehydratase protein bin=GWF2_Lentisphaerae_52_8 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
NAD-dependent dehydratase
Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
PLM3_60_b1_sep16_scaffold_812_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8545..9309)
DNA (765bp) protein (255aa)
Putative ABC transport system, permease component Tax=Candidatus Nitrospira defluvii RepID=D8PIN3_9BACT
putative ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_812_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(9312..10268)
DNA (957bp) protein (319aa)
ABC transporter ATPase (EC:3.6.3.-)
ABC-type transport system, ATPase component Tax=Candidatus Nitrospira defluvii RepID=D8PIN4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_812_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10341..11225)
DNA (885bp) protein (295aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIN5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_812_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11222..13045)
DNA (1824bp) protein (608aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIN6_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43123.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_812_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13392..13907)
DNA (516bp) protein (172aa)
Type IV pilin PilA Tax=Candidatus Nitrospira defluvii RepID=D8PIN7_9BACT
pilA; type IV pilin PilA
Type IV pilin PilA {ECO:0000313|EMBL:CBK43124.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_812_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14300..14812)
DNA (513bp) protein (171aa)
Type IV pilin PilA Tax=Candidatus Nitrospira defluvii RepID=D8PIN7_9BACT
pilA; type IV pilin PilA
Type IV pilin PilA {ECO:0000313|EMBL:CBK43124.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_812_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15097..16962)
DNA (1866bp) protein (622aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIN9_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_812_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17045..18391)
DNA (1347bp) protein (449aa)
dnaB; replicative DNA helicase (EC:3.6.1.-)
Replicative DNA helicase {ECO:0000313|EMBL:CBK43127.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK43127.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Replicative DNA helicase Tax=Candidatus Nitrospira defluvii RepID=D8PIP0_9BACT
PLM3_60_b1_sep16_scaffold_812_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(18363..19754)
DNA (1392bp) protein (464aa)
ATP phosphoribosyltransferase regulatory subunit Tax=Candidatus Nitrospira defluvii RepID=D8PIP1_9BACT
hisZ; ATP phosphoribosyltransferase regulatory subunit
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_812_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(19816..21408)
DNA (1593bp) protein (531aa)
serA; d-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:CBK43129.1}; EC=1.1.1.95 {ECO:0000313|EMBL:CBK43129.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
D-3-phosphoglycerate dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PIP2_9BACT
PLM3_60_b1_sep16_scaffold_812_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(21440..22378)
DNA (939bp) protein (313aa)
sgaA; serine-glyoxylate transaminase (EC:2.6.1.45)
Serine-glyoxylate transaminase {ECO:0000313|EMBL:CBK43130.1}; EC=2.6.1.45 {ECO:0000313|EMBL:CBK43130.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Serine-glyoxylate transaminase Tax=Candidatus Nitrospira defluvii RepID=D8PIP3_9BACT
PLM3_60_b1_sep16_scaffold_812_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

22647..23996
DNA (1350bp) protein (450aa)
putative lytic murein transglycosylase (EC:3.2.1.-)
Putative Lytic murein transglycosylase Tax=Candidatus Nitrospira defluvii RepID=D8PIP4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_812_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(24036..24809)
DNA (774bp) protein (258aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIP5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43132.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_812_22
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

24973..25152
DNA (180bp) protein (60aa)
bioF; 8-amino-7-oxononanoate synthase (EC:2.3.1.47)
8-amino-7-oxononanoate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PIP6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 22 items

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