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PLM3_60_b1_sep16_scaffold_914

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_914_1
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

3..284
DNA (282bp) protein (94aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG49_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_914_2
unknown

Not on your lists

347..487
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_914_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(447..1526)
DNA (1080bp) protein (360aa)
Pili retraction protein bin=GWA2_Elusimicrobia_69_24 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
pili retraction protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_914_4
unknown

Not on your lists

comp(1769..2080)
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_914_5
unknown

Not on your lists

comp(2150..2293)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_914_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

2798..3556
DNA (759bp) protein (253aa)
hypothetical protein bin=bin7_NC10_sister species=Metallosphaera cuprina genus=Metallosphaera taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_914_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3511..3663
DNA (153bp) protein (51aa)
hypothetical protein bin=bin7_NC10_sister species=Metallosphaera cuprina genus=Metallosphaera taxon_order=Sulfolobales taxon_class=Thermoprotei phylum=Crenarchaeota tax=bin7_NC10_sister organism_group=NC10
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_914_8
RIFOXYD12_FULL_Elusimicrobia_66_9_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3743..4225)
DNA (483bp) protein (161aa)
Tax=RIFOXYD12_FULL_Elusimicrobia_66_9_curated
PLM3_60_b1_sep16_scaffold_914_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4350..4493)
DNA (144bp) protein (48aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CBK40607.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
succinyl-CoA synthetase subsunit alpha Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ABB5
PLM3_60_b1_sep16_scaffold_914_10
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(4516..5610)
DNA (1095bp) protein (365aa)
poly-beta-hydroxybutyrate polymerase Tax=Mastigocladopsis repens RepID=UPI00031789F5
poly(R)-hydroxyalkanoic acid synthase subunit PhaC
Poly-beta-hydroxybutyrate polymerase {ECO:0000313|EMBL:KIJ78469.1}; species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" source="Tolypothrix campylonemoides VB511288.;"
PLM3_60_b1_sep16_scaffold_914_11
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5704..6765)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=Chlorogloeopsis RepID=UPI0002E27F68
poly(R)-hydroxyalkanoic acid synthase subunit PhaE
Poly(R)-hydroxyalkanoic acid synthase, class III, PhaE subunit {ECO:0000313|EMBL:ADN13330.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM3_60_b1_sep16_scaffold_914_12
Alkalilimnicola ehrlichii, Alkalilimnicola, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6797..7294)
DNA (498bp) protein (166aa)
Putative uncharacterized protein Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0A5C8_ALKEH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI57959.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Alkalilimnicola.;" source="Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1).;"
PLM3_60_b1_sep16_scaffold_914_13
unknown

Not on your lists

comp(7313..7561)
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_914_14
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(7844..8626)
DNA (783bp) protein (261aa)
hypothetical protein Tax=Ureibacillus thermosphaericus RepID=UPI0002F5E63F
3-ketoacyl-acp reductase
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_b1_sep16_scaffold_914_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(8690..9868)
DNA (1179bp) protein (393aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EEF59269.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EEF59269.1};; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
atoB; acetyl-Coa acetyltransferase (EC:2.3.1.9)
Acetyl-CoA acetyltransferase Tax=Pedosphaera parvula Ellin514 RepID=B9XLM1_9BACT
PLM3_60_b1_sep16_scaffold_914_16

Not on your lists

comp(10331..10762)
DNA (432bp) protein (144aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA12521.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3_60_b1_sep16_scaffold_914_17
R_Deltaproteobacteria_44_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11157..11558)
DNA (402bp) protein (134aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Thiolase Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTX0_9BACL
Tax=RIFCSPLOWO2_02_Deltaproteobacteria_44_9_curated
PLM3_60_b1_sep16_scaffold_914_18

Not on your lists

comp(11944..12597)
DNA (654bp) protein (218aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA12521.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3_60_b1_sep16_scaffold_914_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12950..13753
DNA (804bp) protein (268aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PD09_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_914_20

Not on your lists

14195..14620
DNA (426bp) protein (142aa)
Uncharacterized protein {ECO:0000313|EMBL:AIA12521.1}; Flags: Fragment;; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
PLM3_60_b1_sep16_scaffold_914_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14994..15446)
DNA (453bp) protein (151aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CBK40607.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
succinyl-CoA synthetase subsunit alpha Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2ABB5
Displaying 21 items

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