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PLM3_60_b1_sep16_scaffold_923

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_923_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3..875
DNA (873bp) protein (291aa)
Putative ATPase, Mrp homolog Tax=Candidatus Nitrospira defluvii RepID=D8PAD0_9BACT
mrp; putative ATPase
Putative ATPase, Mrp homolog {ECO:0000313|EMBL:CBK40189.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_923_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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988..1755
DNA (768bp) protein (256aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAD1_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_923_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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1843..2625
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAD2_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40191.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_923_4
unknown

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2838..3026
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_923_5
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3248..4480)
DNA (1233bp) protein (411aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D65_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ70177.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
PLM3_60_b1_sep16_scaffold_923_6

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comp(4467..7406)
DNA (2940bp) protein (980aa)
BpmI endonuclease-methyltransferase fusion protein type IIG Tax=uncultured archaeon GZfos9D8 RepID=Q647Q6_9ARCH
BpmI endonuclease-methyltransferase fusion protein type IIG {ECO:0000313|EMBL:AAU84371.1}; species="Archaea; environmental samples.;" source="uncultured archaeon GZfos9D8.;"
eco57IR: type IIS restriction enzyme Eco57I
PLM3_60_b1_sep16_scaffold_923_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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7905..8657
DNA (753bp) protein (251aa)
Probable transcriptional regulatory protein NIDE0415 Tax=Candidatus Nitrospira defluvii RepID=D8PAD3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_923_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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8735..9343
DNA (609bp) protein (203aa)
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvA Tax=Candidatus Nitrospira defluvii RepID=D8PAD4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_923_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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9346..9885
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAD5_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_923_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9973..10977
DNA (1005bp) protein (335aa)
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.1.-)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016, ECO:0000313|EMBL:CBK40195.1}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Holliday junction ATP-dependent DNA helicase RuvB Tax=Candidatus Nitrospira defluvii RepID=D8PAD6_9BACT
PLM3_60_b1_sep16_scaffold_923_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11182..12285
DNA (1104bp) protein (368aa)
pheA; p-protein, bifunctional chorismate mutase/prephenate dehydratase (EC:4.2.1.51 5.4.99.5)
P-protein, bifunctional chorismate mutase/prephenate dehydratase Tax=Candidatus Nitrospira defluvii RepID=D8PAD7_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_923_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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12385..13464
DNA (1080bp) protein (360aa)
hisC; histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PAD8_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_923_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13486..14499
DNA (1014bp) protein (338aa)
aroF; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
3-deoxy-7-phosphoheptulonate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PAD9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_923_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14603..15187
DNA (585bp) protein (195aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PAE0_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 14 items

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