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PLM3_60_b1_sep16_scaffold_4077

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_4077_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

91..870
DNA (780bp) protein (260aa)
surE; 5'-nucleotidase SurE (EC:3.1.3.5)
5'-nucleotidase SurE Tax=Candidatus Nitrospira defluvii RepID=D8P8E4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

889..1545
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8E3_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_4077_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1539..3011
DNA (1473bp) protein (491aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8P8E2_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_4077_4
CSP1_5_NC10, NC10, Bacteria

Not on your lists

2986..3744
DNA (759bp) protein (253aa)
RNA methyltransferase, TrmH family, group 3 (EC:2.1.1.-); K03218 23S rRNA (guanosine2251-2'-O)-methyltransferase [EC:2.1.1.185] bin=bin3_NC10 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin3_NC10 organism_group=NC10
RNA methyltransferase, TrmH family, group 3 (EC:2.1.1.-)
Tax=CSP1_5_NC10
PLM3_60_b1_sep16_scaffold_4077_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3760..4044)
DNA (285bp) protein (95aa)
Transcriptional regulator, LuxR family Tax=Candidatus Nitrospira defluvii RepID=D8P8E0_9BACT
LuxR family transcriptional regulator (fragment)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_4077_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4253..5035
DNA (783bp) protein (261aa)
pilD; type IV pilus prepilin peptidase PilD (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Candidatus Nitrospira defluvii RepID=D8P8D9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_7
unknown

Not on your lists

5318..5566
DNA (249bp) protein (83aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4077_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5607..6113
DNA (507bp) protein (169aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D7_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6133..6915
DNA (783bp) protein (261aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6959..8419
DNA (1461bp) protein (487aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8D5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_11
unknown

Not on your lists

comp(8679..8987)
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4077_12
unknown

Not on your lists

9139..9267
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4077_13
unknown

Not on your lists

comp(9536..9763)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4077_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9789..10292
DNA (504bp) protein (168aa)
Putative Type IV pilin PilA Tax=Candidatus Nitrospira defluvii RepID=D8P8D3_9BACT
putative type IV pilin PilA
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10324..10812
DNA (489bp) protein (163aa)
Putative Type IV pilus assembly protein PilV Tax=Candidatus Nitrospira defluvii RepID=D8P8D2_9BACT
putative type IV pilus assembly protein PilV
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_4077_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10809..11087
DNA (279bp) protein (93aa)
Putative Type IV pilus assembly protein PilW Tax=Candidatus Nitrospira defluvii RepID=D8P8D1_9BACT
putative type IV pilus assembly protein PilW
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 16 items

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