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PLM3_60_b1_sep16_scaffold_2050

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2050_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(3..326)
DNA (324bp) protein (108aa)
mdh; malate dehydrogenase (EC:1.1.1.37)
Malate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904}; EC=1.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00487, ECO:0000256|SAAS:SAAS00057904};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Malate dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8PJ09_9BACT
PLM3_60_b1_sep16_scaffold_2050_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(499..909)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ10_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43247.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_2050_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1011..4007)
DNA (2997bp) protein (999aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ11_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK43248.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_2050_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

4142..4609
DNA (468bp) protein (156aa)
putative ferredoxin-thioredoxin reductase, catalytic subunit (EC:1.18.-.-)
Putative Ferredoxin-thioredoxin reductase, catalytic subunit {ECO:0000313|EMBL:CBK43249.1}; EC=1.18.-.- {ECO:0000313|EMBL:CBK43249.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Ferredoxin-thioredoxin reductase, catalytic subunit Tax=Candidatus Nitrospira defluvii RepID=D8PJ12_9BACT
PLM3_60_b1_sep16_scaffold_2050_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4606..5880
DNA (1275bp) protein (425aa)
Putative Peptidase Tax=Candidatus Nitrospira defluvii RepID=D8PJ13_9BACT
putative peptidase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(5872..6123)
DNA (252bp) protein (84aa)
UPF0235 protein Dsui_0600 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFY9_AZOSU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6167..6652)
DNA (486bp) protein (162aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIS5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6671..7510)
DNA (840bp) protein (280aa)
Putative Regulatory protein, cbbQ/nirQ/norQ/gpvN family Tax=Candidatus Nitrospira defluvii RepID=D8PJ16_9BACT
putative cbbQ/nirQ/norQ/gpvN family regulatory protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7872..8672)
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ18_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8669..9283)
DNA (615bp) protein (205aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ18_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_11
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9517..10542
DNA (1026bp) protein (342aa)
PAS:GGDEF protein Tax=Dechloromonas aromatica (strain RCB) RepID=Q479K2_DECAR
PAS:GGDEF
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM3_60_b1_sep16_scaffold_2050_12
unknown

Not on your lists

comp(10449..10694)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2050_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10745..12241
DNA (1497bp) protein (499aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ19_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

12302..12595
DNA (294bp) protein (98aa)
Putative Glutaredoxin Tax=Candidatus Nitrospira defluvii RepID=D8PJ20_9BACT
putative glutaredoxin
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12650..13813
DNA (1164bp) protein (388aa)
kamA; l-lysine 2,3-aminomutase (EC:5.4.3.2)
L-lysine 2,3-aminomutase {ECO:0000313|EMBL:CBK43258.1}; EC=5.4.3.2 {ECO:0000313|EMBL:CBK43258.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
L-lysine 2,3-aminomutase Tax=Candidatus Nitrospira defluvii RepID=D8PJ21_9BACT
PLM3_60_b1_sep16_scaffold_2050_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13879..14964
DNA (1086bp) protein (362aa)
dcd; 2'-deoxycytidine 5'-triphosphate deaminase (EC:3.5.4.13)
2'-deoxycytidine 5'-triphosphate deaminase Tax=Candidatus Nitrospira defluvii RepID=D8PJ22_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14961..15377
DNA (417bp) protein (139aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ23_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43260.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_2050_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15388..16149
DNA (762bp) protein (254aa)
glycosyl transferase family 2 protein (EC:2.4.1.-)
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CBK43261.1}; EC=2.4.1.- {ECO:0000313|EMBL:CBK43261.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glycosyl transferase, family 2 Tax=Candidatus Nitrospira defluvii RepID=D8PJ24_9BACT
PLM3_60_b1_sep16_scaffold_2050_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

16219..16935
DNA (717bp) protein (239aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJ25_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2050_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

17013..17747
DNA (735bp) protein (245aa)
fabG5; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:CBK43263.1}; EC=1.1.1.100 {ECO:0000313|EMBL:CBK43263.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
3-oxoacyl-(Acyl-carrier-protein) reductase Tax=Candidatus Nitrospira defluvii RepID=D8PJ26_9BACT
PLM3_60_b1_sep16_scaffold_2050_21
unknown

Not on your lists

comp(17783..18001)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2050_22
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18586..18954)
DNA (369bp) protein (123aa)
Putative diflavin flavoprotein A 3 {ECO:0000313|EMBL:KFB75947.1}; EC=1.-.-.- {ECO:0000313|EMBL:KFB75947.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-02.;"
Beta-lactamase domain-containing protein Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DKS9_9GAMM
beta-lactamase
Displaying 22 items

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