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PLM3_60_b1_sep16_scaffold_2200

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2200_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(45..401)
DNA (357bp) protein (119aa)
Putative Transferase, hexapeptide repeat protein Tax=Candidatus Nitrospira defluvii RepID=D8PA22_9BACT
yrdA; putative transferase
Putative Transferase, hexapeptide repeat protein {ECO:0000313|EMBL:CBK40081.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_2200_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(350..583)
DNA (234bp) protein (78aa)
Putative Transferase, hexapeptide repeat protein Tax=Candidatus Nitrospira defluvii RepID=D8PA22_9BACT
yrdA; putative transferase
Putative Transferase, hexapeptide repeat protein {ECO:0000313|EMBL:CBK40081.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_2200_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(632..1345)
DNA (714bp) protein (238aa)
Putative Lipoprotein Tax=Candidatus Nitrospira defluvii RepID=D8PGC3_9BACT
putative lipoprotein
Putative Lipoprotein {ECO:0000313|EMBL:CBK42310.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_2200_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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1597..2976
DNA (1380bp) protein (460aa)
Ribosomal protein S12 methylthiotransferase RimO Tax=Candidatus Nitrospira defluvii RepID=D8PA23_9BACT
yliG; putative tRNA modifying enzyme, MiaB-like
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_2200_5
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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3122..3985
DNA (864bp) protein (288aa)
hypothetical protein Tax=Leptolyngbya boryana RepID=UPI00035CF306
formyltetrahydrofolate deformylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_60_b1_sep16_scaffold_2200_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(4092..5582)
DNA (1491bp) protein (497aa)
degP; serine protease Do (EC:3.4.21.-)
Serine protease Do {ECO:0000313|EMBL:CBK40083.1}; EC=3.4.21.- {ECO:0000313|EMBL:CBK40083.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Serine protease Do Tax=Candidatus Nitrospira defluvii RepID=D8PA24_9BACT
PLM3_60_b1_sep16_scaffold_2200_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(5703..7106)
DNA (1404bp) protein (468aa)
cztS; heavy metal sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK40084.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Heavy metal sensor histidine kinase Tax=Candidatus Nitrospira defluvii RepID=D8PA25_9BACT
PLM3_60_b1_sep16_scaffold_2200_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7106..7777)
DNA (672bp) protein (224aa)
Heavy metal response regulator Tax=Candidatus Nitrospira defluvii RepID=D8PA26_9BACT
cztR; heavy metal response regulator
Heavy metal response regulator {ECO:0000313|EMBL:CBK40085.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_2200_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(7794..7985)
DNA (192bp) protein (64aa)
succinate dehydrogenase or fumarate reductase, flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2G6_SPHTD
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 9 items

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