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PLM3_60_b1_sep16_scaffold_1146

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1146_1
unknown

Not on your lists

comp(2..106)
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1146_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(347..1477)
DNA (1131bp) protein (377aa)
mraY; phospho-N-acetylmuramoyl-pentapeptide transferase (EC:2.7.8.13)
Phospho-N-acetylmuramoyl-pentapeptide-transferase Tax=Candidatus Nitrospira defluvii RepID=D8PBB6_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1501..1947)
DNA (447bp) protein (149aa)
murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Candidatus Nitrospira defluvii RepID=D8PBB5_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(1901..2908)
DNA (1008bp) protein (336aa)
murF; UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase (EC:6.3.2.10)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Candidatus Nitrospira defluvii RepID=D8PBB5_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1146_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2905..4440)
DNA (1536bp) protein (512aa)
murE; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2,6-diaminopimelate ligase (EC:6.3.2.13)
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Tax=Candidatus Nitrospira defluvii RepID=D8PBB4_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4458..6188)
DNA (1731bp) protein (577aa)
ftsI; peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PBB3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6188..6445)
DNA (258bp) protein (86aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBB2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6442..7416)
DNA (975bp) protein (325aa)
mraW; s-adenosyl-L-methionine-dependent methyltransferase mraW (EC:2.1.1.-)
Ribosomal RNA small subunit methyltransferase H Tax=Candidatus Nitrospira defluvii RepID=D8PBB1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_9
unknown

Not on your lists

7443..7688
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1146_10
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7720..9012)
DNA (1293bp) protein (431aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Asparagine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PBB0_9BACT
PLM3_60_b1_sep16_scaffold_1146_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

9138..10172
DNA (1035bp) protein (345aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBA9_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1146_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10173..11204)
DNA (1032bp) protein (344aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBA8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(11279..11830)
DNA (552bp) protein (184aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBA7_9BACT
yajQ; hypothetical protein
UPF0234 protein yajQ {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1146_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11796..13790)
DNA (1995bp) protein (665aa)
carbon starvation protein CstA Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE01
cstA; carbon starvation protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(13840..14703)
DNA (864bp) protein (288aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PB96_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(14837..15541)
DNA (705bp) protein (235aa)
Putative sugar nucleotidyltransferase and phosphatidyltransferase (Bifunctional enzyme) Tax=Candidatus Nitrospira defluvii RepID=D8PB95_9BACT
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1146_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15551..16273)
DNA (723bp) protein (241aa)
Putative Sugar nucleotidyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PB94_9BACT
putative sugar nucleotidyltransferase
Putative Sugar nucleotidyltransferase {ECO:0000313|EMBL:CBK40503.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1146_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16270..17124)
DNA (855bp) protein (285aa)
phnW; 2-aminoethylphosphonate aminotransferase (EC:2.6.1.-)
2-aminoethylphosphonate aminotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PB93_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 18 items

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