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PLM3_60_b1_sep16_scaffold_1944

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1944_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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comp(2..277)
DNA (276bp) protein (92aa)
Putative uncharacterized transporter yedA Tax=Candidatus Nitrospira defluvii RepID=D8PC45_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1944_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(313..975)
DNA (663bp) protein (221aa)
mdmC; o-methyltransferase (EC:2.1.1.-)
O-methyltransferase Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B029
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1944_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(1036..1299)
DNA (264bp) protein (88aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B026
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1944_4
GWC1_OD1-like_46_13, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(1569..3071)
DNA (1503bp) protein (501aa)
ycbD; aldehyde dehydrogenase ycbD (EC:1.2.1.3) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ycbD; aldehyde dehydrogenase ycbD (EC:1.2.1.3)
Aldehyde dehydrogenase {ECO:0000313|EMBL:KKU20597.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWC1_46_13.;"
PLM3_60_b1_sep16_scaffold_1944_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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3297..3728
DNA (432bp) protein (144aa)
Ferric uptake regulation protein Tax=Candidatus Nitrospira defluvii RepID=D8PC39_9BACT
fur; ferric uptake regulation protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1944_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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3761..4813
DNA (1053bp) protein (351aa)
ABC transporter, periplasmic binding component, putative Fe3+ transport system Tax=Candidatus Nitrospira defluvii RepID=D8PC38_9BACT
putative Fe3+ ABC transporter periplasmic-binding protein
ABC transporter, periplasmic binding component, putative Fe3+ transport system {ECO:0000313|EMBL:CBK40797.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1944_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4830..6386
DNA (1557bp) protein (519aa)
ABC transporter, permease component, putative Fe3+ transport system Tax=Candidatus Nitrospira defluvii RepID=D8PC37_9BACT
putative Fe3+ ABC transporter permease
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1944_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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6408..7514
DNA (1107bp) protein (369aa)
putative Fe3+ ABC transporter ATP-binding protein (EC:3.6.3.30)
ABC transporter, ATP-binding component, putative Fe3+ transport system Tax=Candidatus Nitrospira defluvii RepID=D8PC36_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1944_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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7702..8127
DNA (426bp) protein (142aa)
Biopolymer transport protein ExbB Tax=Candidatus Nitrospira defluvii RepID=D8PC35_9BACT
exbB; biopolymer transport protein Exbb
Biopolymer transport protein ExbB {ECO:0000313|EMBL:CBK40794.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1944_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

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8117..8491
DNA (375bp) protein (125aa)
Biopolymer transport protein ExbD Tax=Candidatus Nitrospira defluvii PF78_9BACT">RepID=D8PF78_9BACT
exbD3; biopolymer transport protein ExbD
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1944_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

8488..9387
DNA (900bp) protein (300aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii PF77_9BACT">RepID=D8PF77_9BACT
putative protein TonB
Uncharacterized protein {ECO:0000313|EMBL:CBK41886.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1944_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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comp(9439..9807)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC32_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1944_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(9936..11003)
DNA (1068bp) protein (356aa)
Putative Thiamine biosynthesis lipoprotein ApbE Tax=Candidatus Nitrospira defluvii RepID=D8PC31_9BACT
putative thiamine biosynthesis lipoprotein ApbE
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1944_14
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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11364..11561
DNA (198bp) protein (66aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFX2_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY14574.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3_60_b1_sep16_scaffold_1944_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

11680..13158
DNA (1479bp) protein (493aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC30_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1944_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

13158..13685
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC29_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40788.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1944_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

13741..14220
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC28_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1944_18
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14238..14750
DNA (513bp) protein (171aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC27_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40786.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1944_19
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

14873..15577
DNA (705bp) protein (235aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PC26_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40785.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1944_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15784..17637)
DNA (1854bp) protein (618aa)
topA; DNA topoisomerase I (EC:5.99.1.2)
DNA topoisomerase 1 Tax=Candidatus Nitrospira defluvii RepID=D8PC22_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 20 items

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