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PLM3_60_b1_sep16_scaffold_373_22

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 20642..21001

Top 3 Functional Annotations

Value Algorithm Source
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 65.0
  • Coverage: 120.0
  • Bit_score: 152
  • Evalue 6.70e-35
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.0
  • Coverage: 120.0
  • Bit_score: 152
  • Evalue 3.30e-34
DNA-directed RNA polymerase subunit omega Tax=Candidatus Nitrospira defluvii RepID=D8PFY6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 65.0
  • Coverage: 120.0
  • Bit_score: 152
  • Evalue 2.40e-34

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Taxonomy

Candidatus Nitrospira defluvii → Nitrospira → Nitrospirales → Nitrospira → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 360
ATGATTGACATCCAATCCTTGCTGCCAGAATACCCCCAGGAACAGTTTGATTCTCGTTATCGATTGGTCATCGTCGCCGCAGAACGCGCCAAGCATCTGATCCAAGGCGCCAGGCCAACCGGCGCATCGAAGTTCACGAAAGAAACCGCGATCGCGCTCGATGAGGTCCTCCAGGGCCTGATCAAGTATCTCAAAGGCAAGGAAGCCAGACAAGCGATGAAGGACTCCAAACGAGGCAAGGAAAGCGAGACGGAACGAATGGCGATGATGACGGGAGAGGACGTTCGAGAGATCAAGAAAGAGCTGGGCGTCTATGTGGACGACTCGACGAAACCGGTGGAATCGGACAGCGAAGAATAG
PROTEIN sequence
Length: 120
MIDIQSLLPEYPQEQFDSRYRLVIVAAERAKHLIQGARPTGASKFTKETAIALDEVLQGLIKYLKGKEARQAMKDSKRGKESETERMAMMTGEDVREIKKELGVYVDDSTKPVESDSEE*