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PLM3_60_b1_sep16_scaffold_2126_12

Organism: PLM3_60_b1_sep16_Nitrospirae_58_7

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 ASCG 14 / 38
Location: 8071..9330

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=Candidatus Nitrospira defluvii RepID=D8PAG1_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 60.6
  • Coverage: 419.0
  • Bit_score: 487
  • Evalue 1.10e-134
rpoD; RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 419.0
  • Bit_score: 487
  • Evalue 3.10e-135
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 411.0
  • Bit_score: 536
  • Evalue 2.90e-149

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Taxonomy

R_Nitrospirae_62_14 → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1260
ATGAAGCAAGACAATCTGTTCGATGATCGTCGAGAGCAAGAGCAGCCGGCGGCGTTGGACCCGGAGGCTGACGACCCGGAAGCGAGCGATCTCCTGGAAATGATCGAACGTGATTCGACTGCGTCCAGCGTTGCCGAGGGCCGGCCTGATCAGGAAAAAGCGTCCGACCGGAAGTCAGAAGGCCCGGTTGCGCTGGAATCGCTCTACTTCCGTTCGTTCGGACGACGAACGCTTCTGAACAGGGAAGAAGAGGTGGCGCTGGCCAAGCGGATTGACCAGGGAGACAGGGCCATCCGCAGCGCGCTCCGGGAAGCGATCCGGATCGCCGCTCGCATGCGCAAGACGGATAAACTCCAGGCAGCCCTGCGCACCCTCCAGGAAGTGAAAGGGCTCAGCGGTCTCTCTGCGATCGCCCTCAATAAGGCTGACGAGGCCCTTGTCGAACTGTTGCAAGAAGCGAAGGCCTCGGGCAGGGTGGCGGCCTACAGACTCAAGCACTTGGGGCATCGCCGGCGCCTCGTGCGCGAGTCTCGCGCTCTTCTCGAGAGGGCCAAGGACGAACTGGTGCGGTGCAATTTGCGGCTGGTCGTTGACATCGCCAAGCGCTACAACGGCCGAGGACTCGCTCTCCTCGATTTGGTTCAGGAAGGCAACATGGGCTTGATGAAAGCGGCCGAACGGTTCCAGTACCGAAAGGGCTTCAAGTTCAGCACCTATGCGACCTGGTGGGTCCGCCAGGGTATCACGCGGGCGCTGGCTGACCAGTCCCGGACCATCAGAGTACCTGTGCACCTCACCGAGGCCTCTCACCGAATCACCAGAACGTCGCGACGGCTGGTTCAGCAATTTGGCCGTGAACCGAGGACCGCCGAGCTGGCAAAGGAACTGCGCGTCGGTCCGGACAAAATCCAGGAGACTCTGCAGGTCTTCCAGCCGCCCATCTCCTTGGAGACTCCGATCGGAGATGGAGAAACGTCCTTCGGAGAACTGCTCCCGGACCGCCAAGCAGTCTCGCCGGCCGCTCACGTCCAACGATCCGAACTGACTCGCCAACTGGGCCGGATTCTGGAGGCGCTCACCCCGCGAGAGCAAATGGTCATCCGGCTACGGTTCGGCATCGGGCAGGACGAACCTTACACGCTTGAGCAGGTCGGACAAAACCTCTCCGTGACCCGCGAGCGCATCCGCCAGATCGAGGCGAAGGCCCTCAAGAAACTGAAGACCCCAGAAGTTAAGCGGATGTTTGCCGAAATTCGGTAA
PROTEIN sequence
Length: 420
MKQDNLFDDRREQEQPAALDPEADDPEASDLLEMIERDSTASSVAEGRPDQEKASDRKSEGPVALESLYFRSFGRRTLLNREEEVALAKRIDQGDRAIRSALREAIRIAARMRKTDKLQAALRTLQEVKGLSGLSAIALNKADEALVELLQEAKASGRVAAYRLKHLGHRRRLVRESRALLERAKDELVRCNLRLVVDIAKRYNGRGLALLDLVQEGNMGLMKAAERFQYRKGFKFSTYATWWVRQGITRALADQSRTIRVPVHLTEASHRITRTSRRLVQQFGREPRTAELAKELRVGPDKIQETLQVFQPPISLETPIGDGETSFGELLPDRQAVSPAAHVQRSELTRQLGRILEALTPREQMVIRLRFGIGQDEPYTLEQVGQNLSVTRERIRQIEAKALKKLKTPEVKRMFAEIR*