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PLM3_60_b1_sep16_scaffold_3201

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3201_1
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

comp(3..395)
DNA (393bp) protein (131aa)
Major facilitator superfamily MFS_1 bin=GWC2_Planctomycete_KSU_39_26 species=Chroococcidiopsis thermalis genus=Chroococcidiopsis taxon_order=Pleurocapsales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
Major Facilitator Superfamily
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_60_b1_sep16_scaffold_3201_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(435..1856)
DNA (1422bp) protein (474aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00036799CF
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_3201_3
unknown

Not on your lists

1902..2354
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_4
unknown

Not on your lists

comp(2374..2742)
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_5
unknown

Not on your lists

2804..3223
DNA (420bp) protein (140aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_6
Mycobacterium rhodesiae, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3231..4409)
DNA (1179bp) protein (393aa)
Glycosyl transferase, UDP-glucuronosyltransferase Tax=Mycobacterium rhodesiae (strain NBB3) RepID=G8RHV2_MYCRN
UDP-glucuronosyltransferase
Glycosyl transferase, UDP-glucuronosyltransferase {ECO:0000313|EMBL:AEV72102.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rhodesiae (strain NBB3).;"
PLM3_60_b1_sep16_scaffold_3201_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4406..5698)
DNA (1293bp) protein (431aa)
amino acid permease bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Flexithrix dorotheae genus=Flexithrix taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
amino acid permease-associated protein
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_b1_sep16_scaffold_3201_8
unknown

Not on your lists

comp(5801..6334)
DNA (534bp) protein (178aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_9
GWC2_Nitrospirae_56_14_curated, Nitrospirae, Bacteria

Not on your lists

comp(6691..7551)
DNA (861bp) protein (287aa)
Diguanylate cyclase bin=GWC2_Nitrospirae-rel_56_14 species=Pelobacter propionicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
diguanylate cyclase
Tax=GWC2_Nitrospirae_56_14_curated
PLM3_60_b1_sep16_scaffold_3201_10
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7571..8314)
DNA (744bp) protein (248aa)
hypothetical protein Tax=Aquaspirillum serpens RepID=UPI0003B6D364
Methyltransferase type 11
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_60_b1_sep16_scaffold_3201_11
Thalassomonas actiniarum, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8464..9573)
DNA (1110bp) protein (370aa)
Uncharacterized protein Tax=Cellvibrio sp. BR RepID=I3IEF9_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KJE41169.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas actiniarum.;"
PLM3_60_b1_sep16_scaffold_3201_12
Cellvibrio sp. BR, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9605..10045)
DNA (441bp) protein (147aa)
Uncharacterized protein Tax=Cellvibrio sp. BR RepID=I3IEG0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIK46445.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio sp. BR.;"
PLM3_60_b1_sep16_scaffold_3201_13
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(10045..11238)
DNA (1194bp) protein (398aa)
Uncharacterized protein Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0B4K4_9ARCH
hypothetical protein
Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
PLM3_60_b1_sep16_scaffold_3201_14
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11439..12374)
DNA (936bp) protein (312aa)
Beta-lactamase family protein Tax=Bacteriovorax sp. DB6_IX RepID=T0TAC4_9DELT
Beta-lactamase family protein {ECO:0000313|EMBL:EQC52502.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_3201_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(12822..13199)
DNA (378bp) protein (126aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q021Z4_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84219.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_3201_16
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

13319..14494
DNA (1176bp) protein (392aa)
Aminotransferase, class V superfamily Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VWE4_9CYAN
Aminotransferase, class V superfamily {ECO:0000313|EMBL:EDX73652.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
cysteine desulfurase
PLM3_60_b1_sep16_scaffold_3201_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14549..15688
DNA (1140bp) protein (380aa)
Putative acetylornithine deacetylase Tax=Deinococcus deserti (strain VCD115 / DSM 17065 / LMG 22923) RepID=C1D2J8_DEIDV
acetylornithine deacetylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_3201_18
GWA2_Nitrospirae_42_11_curated, Nitrospirae, Bacteria

Not on your lists

15870..17558
DNA (1689bp) protein (563aa)
hypothetical protein Tax=zeta proteobacterium SCGC AB-133-G06 RepID=UPI000376C056
conserved hypothetical protein
Tax=GWA2_Nitrospirae_42_11_curated
PLM3_60_b1_sep16_scaffold_3201_19
unknown

Not on your lists

18250..18699
DNA (450bp) protein (150aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_20
unknown

Not on your lists

19547..20518
DNA (972bp) protein (324aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_21
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

20876..21358
DNA (483bp) protein (161aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V6_GEMAT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAH38781.1}; species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC; 100505).;"
PLM3_60_b1_sep16_scaffold_3201_22
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(21457..21990)
DNA (534bp) protein (178aa)
ial:IALB_0205 msrA; Peptide methionine sulfoxide reductase; K07304 peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11] bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
peptide methionine sulfoxide reductase
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3_60_b1_sep16_scaffold_3201_23
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(22019..22921)
DNA (903bp) protein (301aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00038283F5
von Willebrand factor, type A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3_60_b1_sep16_scaffold_3201_24
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(22986..23387)
DNA (402bp) protein (134aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Scalindua.;" source="Candidatus Scalindua brodae.;"
Ribonuclease VapC Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G6J0_9DELT
PilT protein domain-containing protein
PLM3_60_b1_sep16_scaffold_3201_25
unknown

Not on your lists

comp(23384..23629)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3201_26
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23689..24768)
DNA (1080bp) protein (360aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
Tax=CG_Desulfarul_01
Displaying 26 items

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