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PLM3_60_b1_sep16_scaffold_3827

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3827_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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1..195
DNA (195bp) protein (65aa)
50S ribosomal protein L22
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_3827_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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233..895
DNA (663bp) protein (221aa)
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
30S ribosomal protein S3
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_3827_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists


906..1325
DNA (420bp) protein (140aa)
50S ribosomal protein L16 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000364D359
rplP; 50S ribosomal protein L16
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_b1_sep16_scaffold_3827_4
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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1322..1522
DNA (201bp) protein (67aa)
50S ribosomal protein L29 Tax=Thermincola potens (strain JR) RepID=D5XA91_THEPJ
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
50S ribosomal protein L29
PLM3_60_b1_sep16_scaffold_3827_5
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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1622..1906
DNA (285bp) protein (95aa)
30S ribosomal protein S17 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=RS17_PELTS
RpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI).;"
PLM3_60_b1_sep16_scaffold_3827_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists


1919..2287
DNA (369bp) protein (123aa)
50S ribosomal protein L14 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003803127
rplN; 50S ribosomal protein L14
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_3827_7
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists


2290..2613
DNA (324bp) protein (108aa)
rplX; 50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 bin=CNBR_ACIDO species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribosomal protein L24
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_3827_8
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists


2589..3263
DNA (675bp) protein (225aa)
50S ribosomal protein L5 Tax=Bacillus sp. L1(2012) RepID=UPI00034AB07C
rplE; 50S ribosomal protein L5
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_60_b1_sep16_scaffold_3827_9
Desulfovibrio sp. FW1012B, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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3271..3456
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z Tax=Desulfovibrio RepID=G7Q9V1_9DELT
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364, ECO:0000256|SAAS:SAAS00014984}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio sp. FW1012B.;"
rpsN; 30S ribosomal protein S14
PLM3_60_b1_sep16_scaffold_3827_10
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3551..3946
DNA (396bp) protein (132aa)
30S ribosomal protein S8 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGA0_9FIRM
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT 1.;"
PLM3_60_b1_sep16_scaffold_3827_11
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists


3997..4539
DNA (543bp) protein (181aa)
50S ribosomal protein L6 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=RL6_CALBD
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
rplF; 50S ribosomal protein L6
PLM3_60_b1_sep16_scaffold_3827_12
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


4550..4918
DNA (369bp) protein (123aa)
50S ribosomal protein L18 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B2T9_CLOA9
rplR; 50S ribosomal protein L18
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM3_60_b1_sep16_scaffold_3827_13
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists


4929..5411
DNA (483bp) protein (161aa)
30S ribosomal protein S5 Tax=Enterococcus columbae DSM 7374 = ATCC 51263 RepID=S1P4A8_9ENTE
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
30S ribosomal protein S5
PLM3_60_b1_sep16_scaffold_3827_14
Bacillus sp. SJS, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


5415..5627
DNA (213bp) protein (71aa)
50S ribosomal protein L30 Tax=Arthrobacter sp. PAO19 RepID=UPI0003B751DD
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sp. SJS.;"
50S ribosomal protein L30
PLM3_60_b1_sep16_scaffold_3827_15
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists


5629..6024
DNA (396bp) protein (132aa)
50S ribosomal protein L15 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJK4_SYNLT
50S ribosomal protein L15
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_3827_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists


6008..7399
DNA (1392bp) protein (464aa)
protein translocase subunit secY/sec61 alpha; K03076 preprotein translocase subunit SecY bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
protein translocase subunit SecY/sec61 alpha
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 16 items

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