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PLM3_60_b1_sep16_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_103_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(3..3383)
DNA (3381bp) protein (1127aa)
serine/threonine protein kinase
serine/threonin protein kinase bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_103_2
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(3494..4120)
DNA (627bp) protein (209aa)
O-methyltransferase family protein bin=bin3_NC10 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin3_NC10 organism_group=NC10
O-methyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_b1_sep16_scaffold_103_3
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(4130..5050)
DNA (921bp) protein (307aa)
Glycerophosphoryl diester phosphodiesterase Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IY83_DEIGD
glycerophosphoryl diester phosphodiesterase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_60_b1_sep16_scaffold_103_4
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

5171..6892
DNA (1722bp) protein (574aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003825F8C
Cna B domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_60_b1_sep16_scaffold_103_5
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

6895..8592
DNA (1698bp) protein (566aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQ94_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM3_60_b1_sep16_scaffold_103_6
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(8677..9618)
DNA (942bp) protein (314aa)
Pyridoxal-5'-phosphate-dependent protein beta subunit Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAE1_SPHTD
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_b1_sep16_scaffold_103_7
R_Deltaproteobacteria_43_9, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9615..10280)
DNA (666bp) protein (222aa)
octanoyltransferase Tax=Laceyella sacchari RepID=UPI0003B6C2AE
lipoate-protein ligase B
Tax=RIFCSPHIGHO2_12_FULL_Deltaproteobacteria_43_9_curated
PLM3_60_b1_sep16_scaffold_103_8
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(10259..11455)
DNA (1197bp) protein (399aa)
2-oxoglutarate dehydrogenase complex E2 component bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
catalytic domain of components of various dehydrogenase complexes
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_60_b1_sep16_scaffold_103_9
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(11455..12426)
DNA (972bp) protein (324aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1)
Branched-chain alpha-keto acid dehydrogenase E1 component Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH09_CHLTF
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_b1_sep16_scaffold_103_10
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

12491..14620
DNA (2130bp) protein (710aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI000372647D
hypothetical protein
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_60_b1_sep16_scaffold_103_11
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(14727..15686)
DNA (960bp) protein (320aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1)
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_103_12
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(15784..17187)
DNA (1404bp) protein (468aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase Tax=Sorangium cellulosum So0157-2 RepID=S4YED7_SORCE
Tax=RBG_16_Archaea_50_20_curated
PLM3_60_b1_sep16_scaffold_103_13
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(17303..18355)
DNA (1053bp) protein (351aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase subunit alpha bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_60_b1_sep16_scaffold_103_14
Candidatus Acetothermus autotrophicum, Candidatus Acetothermum, Acetothermia, Bacteria

Not on your lists

comp(18367..19596)
DNA (1230bp) protein (410aa)
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) Tax=uncultured candidate division OP1 bacterium RepID=H5S9Z8_9BACT
Pyruvate dehydrogenase E2 component (Dihydrolipoamide acetyltransferase) {ECO:0000313|EMBL:BAL60156.1}; species="Bacteria; Acetothermia; Candidatus Acetothermum.;" source="Candidatus Acetothermus autotrophicum.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_103_15
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19606..20583)
DNA (978bp) protein (326aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.4)
Branched-chain alpha-keto acid dehydrogenase E1 component {ECO:0000313|EMBL:ABC81598.1}; EC=1.2.4.4 {ECO:0000313|EMBL:ABC81598.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-C).;"
Branched-chain alpha-keto acid dehydrogenase E1 component Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IIW8_ANADE
PLM3_60_b1_sep16_scaffold_103_16
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(20583..21683)
DNA (1101bp) protein (367aa)
3-methyl-2-oxobutanoate dehydrogenase Tax=Sorangium cellulosum So0157-2 RepID=S4XW51_SORCE
3-methyl-2-oxobutanoate dehydrogenase
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_103_17
unknown

Not on your lists

comp(21875..22705)
DNA (831bp) protein (277aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_103_18
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(22840..23868)
DNA (1029bp) protein (343aa)
Uncharacterized protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9U582_9CYAN
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
PLM3_60_b1_sep16_scaffold_103_19
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23944..24951
DNA (1008bp) protein (336aa)
phosphate acetyltransferase (EC:2.3.1.8)
Phosphate acetyltransferase {ECO:0000313|EMBL:ADW13416.1}; EC=2.3.1.8 {ECO:0000313|EMBL:ADW13416.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
Phosphate acetyltransferase Tax=Geobacter sp. (strain M18) RepID=E8WIB5_GEOS8
PLM3_60_b1_sep16_scaffold_103_20
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

24890..25564
DNA (675bp) protein (225aa)
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_103_21
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25510..26517
DNA (1008bp) protein (336aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(S) Tax=Gloeocapsa sp. PCC 7428 RepID=K9XLY0_9CHRO
diguanylate cyclase/phosphodiesterase with PAS/PAC and MHYT sensor(s)
Tax=GWD2_Desulfuromonadales_61_12_curated
PLM3_60_b1_sep16_scaffold_103_22
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26492..26920
DNA (429bp) protein (143aa)
Uncharacterized conserved protein Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SVJ0_JANMA
hypothetical protein
Tax=CG_Beta_01
PLM3_60_b1_sep16_scaffold_103_23
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(27204..29477)
DNA (2274bp) protein (758aa)
Putative ABC transporter, periplasmic substrate-binding protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1CYE4_MYXXD
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:CDM66396.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ABC transporter periplasmic substrate-binding protein
PLM3_60_b1_sep16_scaffold_103_24
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(29470..30231)
DNA (762bp) protein (254aa)
Methyl-accepting chemotaxis sensory transducer, class 40+24H Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EAK7_GEOBB
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:CDM66396.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
mcp028; methyl-accepting chemotaxis sensory transducer
PLM3_60_b1_sep16_scaffold_103_25
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(30945..32399)
DNA (1455bp) protein (485aa)
Amidase Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CA50_SPHTD
Amidase
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_60_b1_sep16_scaffold_103_26
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(32866..33618)
DNA (753bp) protein (251aa)
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000256|SAAS:SAAS00055690}; EC=2.4.-.- {ECO:0000256|SAAS:SAAS00279069};; EC=2.4.2.- {ECO:0000256|SAAS:SAAS00055699};; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
Monofunctional biosynthetic peptidoglycan transglycosylase Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C5H6_THEGP
monofunctional biosynthetic peptidoglycan transglycosylase
PLM3_60_b1_sep16_scaffold_103_27
unknown

Not on your lists

comp(33694..34734)
DNA (1041bp) protein (347aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_103_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(34734..35741)
DNA (1008bp) protein (336aa)
ispB; octaprenyl diphosphate synthase; K02523 octaprenyl-diphosphate synthase [EC:2.5.1.90] bin=CNBR_ACIDO species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
polyprenyl synthetase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_103_29
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35741..36250)
DNA (510bp) protein (170aa)
UPF0234 protein TherJR_1429 Tax=Thermincola potens (strain JR) RepID=D5XF65_THEPJ
hypothetical protein
UPF0234 protein TherJR_1429 {ECO:0000256|HAMAP-Rule:MF_00632}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola potens (strain JR).;"
PLM3_60_b1_sep16_scaffold_103_30
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36380..37069
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXN8_NOCFA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD57053.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
Displaying items 1-30 of 57 in total

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