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PLM3_60_b1_sep16_scaffold_2132

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2132_1
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1343
DNA (1341bp) protein (447aa)
Putative oxidoreductase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FVH7_SORC5
oxidoreductase
Putative oxidoreductase {ECO:0000313|EMBL:CAN92277.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM3_60_b1_sep16_scaffold_2132_2
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1509..1829
DNA (321bp) protein (107aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6Q5N8_9ZZZZ
hypothetical protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_60_b1_sep16_scaffold_2132_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1826..2143
DNA (318bp) protein (106aa)
Putative nucleic acid-binding protein, contains PIN domain bin=GWC2_Chloroflexi_73_18 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PilT domain-containing protein
Tax=RBG_16_Anaeromyxobacter_69_14_curated
PLM3_60_b1_sep16_scaffold_2132_4
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2302..3099
DNA (798bp) protein (266aa)
carboxymethylenebutenolidase (EC:3.1.1.45)
Carboxymethylenebutenolidase {ECO:0000313|EMBL:AEN74502.1}; EC=3.1.1.45 {ECO:0000313|EMBL:AEN74502.1};; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
Carboxymethylenebutenolidase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SJW1_RHOMR
PLM3_60_b1_sep16_scaffold_2132_5
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3142..4080
DNA (939bp) protein (313aa)
Response regulator receiver modulated diguanylate cyclase Tax=Geobacter sp. (strain M18) RepID=E8WN08_GEOS8
response regulator receiver modulated diguanylate cyclase
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3_60_b1_sep16_scaffold_2132_6
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4236..6638)
DNA (2403bp) protein (801aa)
Regulator of sigma-B activity, putative Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F8F4_ACIC5
regulator of sigma-B activity
Regulator of sigma-B activity, putative {ECO:0000313|EMBL:ACO34466.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670 /; NBRC 15755 / NCIMB 13165 / 161).;"
PLM3_60_b1_sep16_scaffold_2132_7
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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6961..7605
DNA (645bp) protein (215aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI00037FB8FA
putative peptidase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_2132_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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7769..8389
DNA (621bp) protein (207aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003734FB0
ECF subfamily RNA polymerase sigma-24 factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_b1_sep16_scaffold_2132_9
RIFOXYC2_FULL_RIF01_39_67_curated, RIF1, Bacteria

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8367..8795
DNA (429bp) protein (143aa)
Tax=RIFOXYC2_FULL_RIF01_39_67_curated
PLM3_60_b1_sep16_scaffold_2132_10
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8844..9038
DNA (195bp) protein (65aa)
Glutaredoxin-like domain (DUF836) Tax=Brachybacterium faecium (strain ATCC 43885 / DSM 4810 / NCIB 9860) RepID=C7MFK4_BRAFD
Glutaredoxin {ECO:0000313|EMBL:KFA91409.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
glutaredoxin-like domain-containing protein
PLM3_60_b1_sep16_scaffold_2132_11
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(9103..10761)
DNA (1659bp) protein (553aa)
FtsK/SpoIIIE family protein; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family bin=CNBR_ACIDO species=Acidobacterium capsulatum genus=Acidobacterium taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA translocase FtsK
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_2132_12
BJP_08E140C01_10KDA_Chromatiales_49_130, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10751..11281)
DNA (531bp) protein (177aa)
DNA translocase ftsK Tax=Rheinheimera nanhaiensis E407-8 RepID=I1E0F3_9GAMM
cell division protein FtsK
Tax=BJP_08E140C01_10KDA_Chromatiales_49_130
PLM3_60_b1_sep16_scaffold_2132_13

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comp(11399..11701)
DNA (303bp) protein (101aa)
dimethyladenosine transferase Tax=[Streptococcus] pleomorphus RepID=UPI0003B70027
Ribosomal RNA small subunit methyltransferase A {ECO:0000313|EMBL:KKT46962.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_44_17.;"
dimethyladenosine transferase
Displaying 13 items

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