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PLM3_60_b1_sep16_scaffold_5179

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_5179_1
Marinithermus hydrothermalis, Marinithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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3..245
DNA (243bp) protein (81aa)
Endoribonuclease L-PSP Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NPX6_MARHT
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:AEB11077.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Marinithermus.;" source="Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1).;"
PLM3_60_b1_sep16_scaffold_5179_2
Candidatus Arthromitus sp. SFB-mouse, Candidatus Arthromitus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(237..902)
DNA (666bp) protein (222aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Candidatus Arthromitus.;" source="Arthromitus sp. (strain SFB-mouse-Japan).;"
Pseudouridine synthase Tax=Candidatus Arthromitus RepID=F9VKJ9_ARTSS
rluD; Ribosomal large subunit pseudouridine synthase D
PLM3_60_b1_sep16_scaffold_5179_3
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1202..2125)
DNA (924bp) protein (308aa)
SCP-like extracellular protein Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTI7_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KGG80477.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
SCP-like extracellular protein
PLM3_60_b1_sep16_scaffold_5179_4
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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2257..3000
DNA (744bp) protein (248aa)
Conserved hypothetical signal peptide protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM79_KORVE
signal peptide protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_5179_5
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

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3021..3224
DNA (204bp) protein (68aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_5179_6
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

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3746..4675
DNA (930bp) protein (310aa)
Sugar phosphate permease bin=GWA2_Elusimicrobia_69_24 species=Desulfosporosinus acidiphilus genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
sugar phosphate permease
Tax=GWA2_Elusimicrobia_69_24_curated
PLM3_60_b1_sep16_scaffold_5179_7
unknown

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comp(5073..5816)
DNA (744bp) protein (248aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_5179_8
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5974..7779
DNA (1806bp) protein (602aa)
hypothetical protein Tax=Nafulsella turpanensis RepID=UPI000346483F
Peptidyl-dipeptidase A {ECO:0000313|EMBL:AKF05444.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_5179_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(7829..9229)
DNA (1401bp) protein (467aa)
Anion transporter Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C260_DESTA
anion transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_b1_sep16_scaffold_5179_10
CG_Arma_02, Armatimonadetes, Bacteria

Not on your lists

9260..9748
DNA (489bp) protein (163aa)
Putative uncharacterized protein bin=GWA2_Ignavibacteria-rel_35_8 species=Chlorobium phaeobacteroides genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
hypothetical protein
Tax=CG_Arma_02
PLM3_60_b1_sep16_scaffold_5179_11
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

10087..10683
DNA (597bp) protein (199aa)
CDP-alcohol phosphatidyltransferase Tax=uncultured marine bacterium 105 RepID=Q6SI30_9BACT
CDP-alcohol phosphatidyltransferase
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_5179_12
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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10683..11636
DNA (954bp) protein (318aa)
sps2; serine/threonine-protein kinase Sps (EC:2.7.11.1)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI00036545C2
Tax=RBG_13_Aminicenantes_59_9_curated
PLM3_60_b1_sep16_scaffold_5179_13
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

11641..12807
DNA (1167bp) protein (389aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L841_9BACT
branched-chain amino acid ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_60_b1_sep16_scaffold_5179_14

Not on your lists

comp(12861..13331)
DNA (471bp) protein (157aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=E6Q1C5_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBI00985.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
Displaying 14 items

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