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PLM3_60_b1_sep16_scaffold_1272

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1272_1
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3..749)
DNA (747bp) protein (249aa)
Magnesium and cobalt transport protein CorA bin=GWC2_Deltaproteobacteria_56_8 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Deltaproteobacteria_56_8 organism_group=Deltaproteobacteria
magnesium Mg(2+) and cobalt Co(2+) transport protein CorA
Tax=GWB2_Deltaproteobacteria_55_19_curated
PLM3_60_b1_sep16_scaffold_1272_2
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(746..2062)
DNA (1317bp) protein (439aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
Ribosomal protein S12 methylthiotransferase RimO Tax=uncultured Acidobacteria bacterium RepID=Q7X2U6_9BACT
MiaB-like tRNA modifying protein YliG
PLM3_60_b1_sep16_scaffold_1272_3
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(2247..3539)
DNA (1293bp) protein (431aa)
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Tax=GWA2_Ignavibacteriae_55_25_curated
PLM3_60_b1_sep16_scaffold_1272_4
R_Acidobacteria_68_18, Acidobacteria, Bacteria

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comp(3595..4560)
DNA (966bp) protein (322aa)
aminoglycoside phosphotransferase bin=CNBR_ACIDO species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
aminoglycoside phosphotransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_1272_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

Not on your lists

comp(4570..5487)
DNA (918bp) protein (306aa)
Mannose-1-phosphate guanylyltransferase Tax=uncultured Acidobacteria bacterium RepID=H5SFU0_9BACT
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:BAL55026.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
nucleotidyl transferase
PLM3_60_b1_sep16_scaffold_1272_6
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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comp(5484..6038)
DNA (555bp) protein (185aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-K06 RepID=UPI0003B6E64B
adenylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_b1_sep16_scaffold_1272_7
bacterium UASB270, Bacteria

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comp(6042..7133)
DNA (1092bp) protein (364aa)
Strongly similar to pleiotrophic regulatory protein DegT Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PV37_9BACT
Pleiotrophic regulatory protein DegT {ECO:0000313|EMBL:GAK61440.1}; species="Bacteria.;" source="bacterium UASB270.;"
pleiotropic regulatory protein
PLM3_60_b1_sep16_scaffold_1272_8
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7523..10327)
DNA (2805bp) protein (935aa)
FHA domain protein Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D9I9_MYXXD
FHA domain-containing protein
FHA domain protein {ECO:0000313|EMBL:ABF91830.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Displaying 8 items

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