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PLM3_60_b1_sep16_scaffold_1547

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1547_1
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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comp(191..613)
DNA (423bp) protein (141aa)
osmC; osmotically inducible protein C (EC:1.11.1.-)
Osmotically inducible protein C Tax=Collimonas fungivorans (strain Ter331) RepID=G0A9D4_COLFT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3_60_b1_sep16_scaffold_1547_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(753..2300)
DNA (1548bp) protein (516aa)
Sulfatase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VH9_SOLUE
sulfatase
Sulfatase {ECO:0000313|EMBL:ABJ86336.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_1547_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(2762..3700)
DNA (939bp) protein (313aa)
K+ channel, inward rectifier Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM86_KORVE
K+ channel protein
K+ channel, inward rectifier {ECO:0000313|EMBL:ABF42014.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_60_b1_sep16_scaffold_1547_4
unknown

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comp(4021..4353)
DNA (333bp) protein (111aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1547_5
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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4551..5132
DNA (582bp) protein (194aa)
PfpI family intracellular peptidase; K05520 protease I [EC:3.2.-.-] bin=bin1_lowGC species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin1_lowGC organism_group=Unknown_CP
PfpI family intracellular peptidase
Tax=CSP1_2_Dadabacteria
PLM3_60_b1_sep16_scaffold_1547_6
unknown

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comp(5166..6074)
DNA (909bp) protein (303aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1547_7
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(6088..6663)
DNA (576bp) protein (192aa)
Transcriptional regulator, ArsR family Tax=Micromonospora lupini str. Lupac 08 RepID=I0KXB5_9ACTO
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCH16212.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupac 08.;"
regulatory protein ArsR
PLM3_60_b1_sep16_scaffold_1547_8
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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6816..9473
DNA (2658bp) protein (886aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=Spirosoma linguale genus=Spirosoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Zinc carboxypeptidase
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM3_60_b1_sep16_scaffold_1547_9
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

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comp(9581..9907)
DNA (327bp) protein (109aa)
SPFH/Band 7/PHB domain protein Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D651_9FIRM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
PLM3_60_b1_sep16_scaffold_1547_10
unknown

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comp(9909..10409)
DNA (501bp) protein (167aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1547_11
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

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comp(10976..11998)
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L221_HALH1
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_b1_sep16_scaffold_1547_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

12174..13685
DNA (1512bp) protein (504aa)
Fe-S protein, radical SAM family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPN3_KORVE
radical SAM protein
Fe-S protein, radical SAM family {ECO:0000313|EMBL:ABF41167.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_60_b1_sep16_scaffold_1547_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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13957..15315
DNA (1359bp) protein (453aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISU5_KORVE
serine/threonin protein kinase
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:ABF40055.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Displaying 13 items

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