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PLM3_60_b1_sep16_scaffold_1652

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1652_1
unknown

Not on your lists

2..127
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1652_2
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

66..509
DNA (444bp) protein (148aa)
id=14424385 bin=bin1_lowGC tax=bin1_lowGC organism_group=Unknown_CP
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
PLM3_60_b1_sep16_scaffold_1652_3
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

689..1123
DNA (435bp) protein (145aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LFR1_9BACT
phnB; glyoxalase/bleomycin resistance protein/dioxygenase
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM3_60_b1_sep16_scaffold_1652_4

Not on your lists

comp(1256..1735)
DNA (480bp) protein (160aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=uncultured bacterium 66 RepID=E3T666_9BACT
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADC35810.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 66.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_1652_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1742..2608)
DNA (867bp) protein (289aa)
Putative uncharacterized protein ypfJ Tax=Candidatus Nitrospira defluvii RepID=B3U4M0_9BACT
ypfJ; hypothetical protein
Putative uncharacterized protein ypfJ {ECO:0000313|EMBL:ACE75587.1}; Uncharacterized protein {ECO:0000313|EMBL:CBK41180.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1652_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2782..3312
DNA (531bp) protein (177aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AM74_AZOBR
Nex18 symbiotically induced protein
Nex18 symbiotically induced protein {ECO:0000313|EMBL:AIB11384.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_b1_sep16_scaffold_1652_7
CG_Nitrosp_02, Nitrospirae, Bacteria

Not on your lists

4078..4410
DNA (333bp) protein (111aa)
Growth inhibitor Tax=Rivularia sp. PCC 7116 RepID=K9RD62_9CYAN
growth inhibitor
Tax=CG_Nitrosp_02
PLM3_60_b1_sep16_scaffold_1652_8
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(4471..5079)
DNA (609bp) protein (203aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P82_SOLUE
serine/threonine protein kinase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3_60_b1_sep16_scaffold_1652_9
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

5186..6391
DNA (1206bp) protein (402aa)
AAA family ATPase bin=GWF2_Lentisphaerae_38_69 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
ATPase AAA
Tax=RIFCSPLOWO2_01_FULL_WOR_2_41_12_curated
PLM3_60_b1_sep16_scaffold_1652_10
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

6651..7811
DNA (1161bp) protein (387aa)
Alanine dehydrogenase/PNT domain protein bin=GWC2_Proteo_65_14_Ab886 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
NAD(P)(+) transhydrogenase
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3_60_b1_sep16_scaffold_1652_11
CSP1_5_NC10, NC10, Bacteria

Not on your lists

8398..9534
DNA (1137bp) protein (379aa)
NAD(P)(+) transhydrogenase; K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2] bin=bin3_NC10 species=Frankia sp. genus=Frankia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
NAD(P) transhydrogenase subunit beta
Tax=CSP1_5_NC10
PLM3_60_b1_sep16_scaffold_1652_12
R_NC10_66_22, NC10, Bacteria

Not on your lists

9577..10011
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
putative signal transduction protein with CBS domains
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_b1_sep16_scaffold_1652_13
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(10024..10884)
DNA (861bp) protein (287aa)
Putative signal protein with GAF, PAS(PAC) and GGDEF domains Tax=Rhodanobacter fulvus Jip2 RepID=I4VWS6_9GAMM
diguanylate cyclase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_b1_sep16_scaffold_1652_14
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(11424..11669)
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWF2_Nitrospirae_44_13 species=Desulfonatronospira thiodismutans genus=Desulfonatronospira taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_60_b1_sep16_scaffold_1652_15
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11891..12091)
DNA (201bp) protein (67aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_b1_sep16_scaffold_1652_16
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13183..14097)
DNA (915bp) protein (305aa)
Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
PLM3_60_b1_sep16_scaffold_1652_17
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14094..17393)
DNA (3300bp) protein (1100aa)
YD repeat protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GE16_GEOUR
YD repeat-containing protein
YD repeat protein {ECO:0000313|EMBL:ABQ25671.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
PLM3_60_b1_sep16_scaffold_1652_18
unknown

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comp(17591..17836)
DNA (246bp) protein (82aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1652_19
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17847..21098)
DNA (3252bp) protein (1084aa)
Parallel beta-helix repeat protein Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M6Z9_GEODF
Parallel beta-helix repeat protein
Repeat-containing protein {ECO:0000313|EMBL:ACM22020.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
PLM3_60_b1_sep16_scaffold_1652_20
unknown

Not on your lists

comp(21098..21856)
DNA (759bp) protein (253aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1652_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(22358..23956)
DNA (1599bp) protein (533aa)
Serine/threonine protein kinase with TPR repeats Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISU5_KORVE
serine/threonin protein kinase
Serine/threonine protein kinase with TPR repeats {ECO:0000313|EMBL:ABF40055.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_60_b1_sep16_scaffold_1652_22
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

comp(23973..24590)
DNA (618bp) protein (206aa)
serine/threonine protein kinase bin=RBG_16_Aminicenantes_63_16_plus tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
serine/threonin protein kinase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3_60_b1_sep16_scaffold_1652_23
unknown

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24624..24830
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1652_24
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

25128..25523
DNA (396bp) protein (132aa)
Probable ribonuclease VapC bin=GWF2_Methylomirabilis_70_14 species=Mycobacterium xenopi genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
vapC13; Conserved protein of unknown function with PIN domain, possible toxin VapC13
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_b1_sep16_scaffold_1652_25
unknown

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comp(25558..25731)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1652_26
unknown

Not on your lists

25773..26102
DNA (330bp) protein (110aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1652_27
Pseudoalteromonas lipolytica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26099..26905
DNA (807bp) protein (269aa)
hypothetical protein Tax=Kangiella aquimarina RepID=UPI00037F59F2
Uncharacterized protein {ECO:0000313|EMBL:EWH04925.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas lipolytica SCSIO 04301.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_1652_28
Kangiella geojedonensis, Kangiella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26910..27890
DNA (981bp) protein (327aa)
FHA domain containing protein Tax=Kangiella koreensis (strain DSM 16069 / KCTC 12182 / SW-125) RepID=C7RBH8_KANKD
FHA domain containing protein {ECO:0000313|EMBL:AKE52022.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Kangiella.;" source="Kangiella geojedonensis.;"
FHA domain-containing protein
Displaying 28 items

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