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PLM3_60_b1_sep16_scaffold_2723

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2723_1
unknown

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comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2723_2
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(720..1583)
DNA (864bp) protein (288aa)
UPI0003CEC05A related cluster Tax=unknown RepID=UPI0003CEC05A
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ESY63591.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
methyltransferase small
PLM3_60_b1_sep16_scaffold_2723_3
unknown

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comp(1621..2178)
DNA (558bp) protein (186aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2723_trna_1
unknown

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comp(2367..2453)
DNA (87bp)
transferRNA Ser
PLM3_60_b1_sep16_scaffold_2723_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(2599..3885)
DNA (1287bp) protein (429aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176, ECO:0000313|EMBL:CBK41909.1};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Serine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8PFA0_9BACT
PLM3_60_b1_sep16_scaffold_2723_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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4023..5036
DNA (1014bp) protein (338aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PFA1_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_2723_6
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

5061..5429
DNA (369bp) protein (123aa)
Rhodanese-like protein Tax=Nitrosomonas sp. (strain Is79A3) RepID=F8GDR1_NITSI
Rhodanese-like protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_2723_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(5499..6062)
DNA (564bp) protein (188aa)
Putative Periplasmic chaperone Skp Tax=Candidatus Nitrospira defluvii RepID=D8PFA4_9BACT
putative periplasmic chaperone Skp
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_2723_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6321..7187)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PFA6_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Displaying 9 items

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