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PLM3_60_b1_sep16_scaffold_1470

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1470_1
unknown

Not on your lists

168..1346
DNA (1179bp) protein (393aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1470_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1428..2348
DNA (921bp) protein (307aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIH2_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1470_3
unknown

Not on your lists

2380..2994
DNA (615bp) protein (205aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1470_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3347..3871)
DNA (525bp) protein (175aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8L5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_1470_5
unknown

Not on your lists

4166..4915
DNA (750bp) protein (250aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1470_6
unknown

Not on your lists

comp(4935..5129)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1470_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5150..5338
DNA (189bp) protein (63aa)
Transposase, IS3 family Tax=Candidatus Nitrospira defluvii RepID=D8PBR6_9BACT
transposase, IS3 family
Transposase, IS3 family {ECO:0000313|EMBL:CBK40675.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1470_8
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

Not on your lists

5698..7227
DNA (1530bp) protein (510aa)
metal-chelation protein CHAD Tax=Saccharopolyspora spinosa RepID=UPI00023797D6
hypothetical protein
Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated
PLM3_60_b1_sep16_scaffold_1470_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(7286..7747)
DNA (462bp) protein (154aa)
Putative Cytochrome c Tax=Candidatus Nitrospira defluvii RepID=D8P894_9BACT
putative cytochrome c
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(7836..8375)
DNA (540bp) protein (180aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P895_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(8548..9147)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P898_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(9260..10789)
DNA (1530bp) protein (510aa)
aldehyde dehydrogenase (EC:1.2.1.3)
Aldehyde dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8P899_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10786..11874)
DNA (1089bp) protein (363aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8A0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43732.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1470_14
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

12312..12560
DNA (249bp) protein (83aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8A2_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_15
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(12775..13146)
DNA (372bp) protein (124aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8A3_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_16
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(13262..13624)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8A5_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_17
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

13975..14745
DNA (771bp) protein (257aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8A6_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_18
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

14812..15429
DNA (618bp) protein (206aa)
thrH; homoserine kinase (EC:2.7.1.39 3.1.3.3)
Homoserine kinase Tax=Candidatus Nitrospira defluvii RepID=D8P8A7_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1470_19
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

Not on your lists

comp(15433..15786)
DNA (354bp) protein (118aa)
Uncharacterized protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T426_META2
hypothetical protein
Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
PLM3_60_b1_sep16_scaffold_1470_20
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15898..17760)
DNA (1863bp) protein (621aa)
recQ; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase {ECO:0000313|EMBL:CBK43740.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK43740.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
ATP-dependent DNA helicase Tax=Candidatus Nitrospira defluvii RepID=D8P8A8_9BACT
PLM3_60_b1_sep16_scaffold_1470_21
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(17897..19597)
DNA (1701bp) protein (567aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8B0_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43742.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1470_22
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

19609..19833
DNA (225bp) protein (75aa)
Rhodopirellula transposase family protein Tax=mine drainage metagenome RepID=T1C0C1_9ZZZZ
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_1470_23
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

Not on your lists

comp(19993..21300)
DNA (1308bp) protein (436aa)
Ammonium transporter Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUX2_9ARCH
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitrosoarchaeum koreensis MY1.;"
amt2; Ammonium transporter 1
PLM3_60_b1_sep16_scaffold_1470_24
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(21849..22148)
DNA (300bp) protein (100aa)
Sec-independent protein translocase protein TatA Tax=Candidatus Nitrospira defluvii RepID=D8P8B1_9BACT
putative twin-arginine translocation protein TatA2
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1470_25
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(22202..22468)
DNA (267bp) protein (89aa)
preprotein translocase subunit TatA Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2B1B2
tatA3; twin-arginine translocation protein tatA3
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Displaying 25 items

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