ggKbase home page

PLM3_60_b1_sep16_scaffold_1767

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1767_1
unknown

Not on your lists

3..122
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1767_trna_1
unknown

Not on your lists

comp(213..285)
DNA (73bp)
transferRNA Cys
PLM3_60_b1_sep16_scaffold_1767_2
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(383..1687)
DNA (1305bp) protein (435aa)
Uncharacterized protein Tax=Planctomyces maris DSM 8797 RepID=A6CC12_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:EDL57763.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_1767_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1850..3031)
DNA (1182bp) protein (394aa)
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.1 {ECO:0000256|SAAS:SAAS00088795, ECO:0000313|EMBL:CBK40636.1};; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PBM7_9BACT
PLM3_60_b1_sep16_scaffold_1767_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(3213..5015)
DNA (1803bp) protein (601aa)
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PBM6_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1767_5
unknown

Not on your lists

comp(4981..5172)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1767_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5169..6185)
DNA (1017bp) protein (339aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PBM5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40634.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1767_7
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(6214..7416)
DNA (1203bp) protein (401aa)
Putative Surface antigen D15 Tax=Candidatus Nitrospira defluvii RepID=D8PBM4_9BACT
putative surface antigen D15
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1767_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7434..8087)
DNA (654bp) protein (218aa)
Putative ABC transporter, auxiliary component, putative ATP-dependent toluene efflux transporter Tax=Candidatus Nitrospira defluvii RepID=D8PBM3_9BACT
putative ABC transporter auxiliary component, putative ATP-dependent toluene efflux transporter
Putative ABC transporter, auxiliary component, putative ATP-dependent toluene efflux transporter {ECO:0000313|EMBL:CBK40632.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_1767_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(8213..8656)
DNA (444bp) protein (148aa)
ABC transporter, periplasmic binding component, putative ATP-dependent toluene efflux transporter Tax=Candidatus Nitrospira defluvii RepID=D8PBM2_9BACT
yrbD; putative ATP-dependent toluene efflux ABC transporter periplasmic-binding protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1767_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(8673..9428)
DNA (756bp) protein (252aa)
yrbF; putative ATP-dependent toluene efflux transporter ATPase (EC:3.6.3.-)
ABC transporter, ATPase component, putative ATP-dependent toluene efflux transporter Tax=Candidatus Nitrospira defluvii RepID=D8PBM1_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1767_11
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(9524..10294)
DNA (771bp) protein (257aa)
ABC transporter, membrane component, putative ATP-dependent toluene efflux transporter Tax=Candidatus Nitrospira defluvii RepID=D8PBM0_9BACT
yrbE; putative toluene efflux ABC transporter ATP-binding protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1767_12
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(10298..10756)
DNA (459bp) protein (153aa)
putative adenosylhomocysteine nucleosidase (EC:3.2.2.9)
Putative Adenosylhomocysteine nucleosidase Tax=Candidatus Nitrospira defluvii RepID=D8PBL9_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_1767_13
unknown

Not on your lists

10775..11083
DNA (309bp) protein (103aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1767_14
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(11125..11928)
DNA (804bp) protein (268aa)
shc; squalene-hopene cyclase (EC:5.4.99.17)
Squalene-hopene cyclase Tax=Candidatus Nitrospira defluvii RepID=D8PBL8_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
Displaying 15 items

View Taxonomy