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PLM3_60_coex_sep16_scaffold_53

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_53_1
unknown

Not on your lists

3..104
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_53_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292..1713)
DNA (1422bp) protein (474aa)
hss; homospermidine synthase (EC:2.5.1.44)
Homospermidine synthase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TJU0_PHAFV
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_53_3
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1941..3071)
DNA (1131bp) protein (377aa)
putative Lysine/ornithine decarboxylase (EC:4.1.1.17)
Diaminopimelate decarboxylase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TM74_PHAFV
Diaminopimelate decarboxylase {ECO:0000313|EMBL:EPY03366.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;"
PLM3_60_coex_sep16_scaffold_53_4
unknown

Not on your lists

comp(3215..3367)
DNA (153bp) protein (51aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_53_5
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3653..4243)
DNA (591bp) protein (197aa)
Glr1282 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NL44_GLOVI
CGNR zinc finger {ECO:0000313|EMBL:GAO01747.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. PSR-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_53_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4388..5215
DNA (828bp) protein (276aa)
Alpha/beta hydrolase fold protein Tax=Rhizobium freirei PRF 81 RepID=N6UVQ5_9RHIZ
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ENN85765.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
alpha/beta hydrolase fold family protein
PLM3_60_coex_sep16_scaffold_53_7
unknown

Not on your lists

comp(5530..6000)
DNA (471bp) protein (157aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_53_8
unknown

Not on your lists

6335..6709
DNA (375bp) protein (125aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_53_9
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7261..8148)
DNA (888bp) protein (296aa)
Cyclohexadienyl dehydrogenase {ECO:0000313|EMBL:EWY37015.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EWY37015.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
tyrA; cyclohexadienyl dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYQ1_RHOCS
PLM3_60_coex_sep16_scaffold_53_10
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8151..9263)
DNA (1113bp) protein (371aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:KJB95252.1}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023, ECO:0000313|EMBL:KJB95252.1};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase Tax=Phaeospirillum fulvum MGU-K5 RepID=S9THM6_PHAFV
PLM3_60_coex_sep16_scaffold_53_11
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9299..10192)
DNA (894bp) protein (298aa)
Putative chorismate mutase {ECO:0000313|EMBL:CCD00939.1}; EC=5.4.99.5 {ECO:0000313|EMBL:CCD00939.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Putative chorismate mutase Tax=Azospirillum brasilense Sp245 RepID=G8ANW6_AZOBR
putative chorismate mutase
PLM3_60_coex_sep16_scaffold_53_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10333..11490
DNA (1158bp) protein (386aa)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070949}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296, ECO:0000256|SAAS:SAAS00070942};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
Homoserine O-acetyltransferase Tax=Azospirillum brasilense Sp245 RepID=G8ANW5_AZOBR
metX; homoserine O-acetyltransferase
PLM3_60_coex_sep16_scaffold_53_13
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11497..12162
DNA (666bp) protein (222aa)
SAM-dependent methyltransferase Tax=Oceanibaculum indicum P24 RepID=K2JWC3_9PROT
Homoserine O-acetyltransferase {ECO:0000313|EMBL:KIL99724.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
SAM-dependent methyltransferase
PLM3_60_coex_sep16_scaffold_53_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12183..12518)
DNA (336bp) protein (112aa)
Putative uncharacterized protein Tax=Pseudomonas stutzeri ATCC 14405 = CCUG 16156 RepID=H7EXB6_PSEST
Uncharacterized protein {ECO:0000313|EMBL:KJB91489.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_53_15
Mesorhizobium sp. LSJC285A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12521..13300)
DNA (780bp) protein (260aa)
UPI0003CE4437 related cluster Tax=unknown RepID=UPI0003CE4437
Membrane protein {ECO:0000313|EMBL:ESW87117.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC285A00.;"
probable conserved integral membrane protein
PLM3_60_coex_sep16_scaffold_53_16
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13651..15708
DNA (2058bp) protein (686aa)
Bll6543 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89G05_BRADU
Uncharacterized protein {ECO:0000313|EMBL:KFC64795.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_53_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15742..16503)
DNA (762bp) protein (254aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8ANW1_AZOBR
Methyltransferase type 11 {ECO:0000313|EMBL:KJB95247.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative SAM-dependent methyltransferase
PLM3_60_coex_sep16_scaffold_53_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16576..17343
DNA (768bp) protein (256aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|HAMAP-Rule:MF_01374}; EC=3.1.2.6 {ECO:0000256|HAMAP-Rule:MF_01374};; Glyoxalase II {ECO:0000256|HAMAP-Rule:MF_01374}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Hydroxyacylglutathione hydrolase Tax=Oceanibaculum indicum P24 RepID=K2K940_9PROT
metallo-beta-lactamase
PLM3_60_coex_sep16_scaffold_53_19
unknown

Not on your lists

comp(17378..17749)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_53_20
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17859..18794
DNA (936bp) protein (312aa)
Bll2566 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89S39_BRADU
Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) {ECO:0000313|EMBL:KFC75153.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_53_21
unknown

Not on your lists

18870..19190
DNA (321bp) protein (107aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_53_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19495..19755
DNA (261bp) protein (87aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI00035E7C74
Sugar ABC transporter permease {ECO:0000313|EMBL:KGM30655.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
rbsC; ribose transport system permease protein
PLM3_60_coex_sep16_scaffold_53_23
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19772..20995)
DNA (1224bp) protein (408aa)
Probable oxalate/formate antiporter Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IV59_POLGS
oxalate/formate antiporter
Probable oxalate/formate antiporter {ECO:0000313|EMBL:ADZ71390.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM3_60_coex_sep16_scaffold_53_24
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21003..21923)
DNA (921bp) protein (307aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31)
6-phosphogluconate dehydrogenase NAD-binding protein Tax=Rhizobium sp. PDO1-076 RepID=H4F856_9RHIZ
6-phosphogluconate dehydrogenase NAD-binding protein {ECO:0000313|EMBL:EHS51026.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
PLM3_60_coex_sep16_scaffold_53_25
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21945..23132)
DNA (1188bp) protein (396aa)
Mandelate racemase/muconate lactonizing enzyme (EC:4.1.2.21)
isomerase Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289D4E4
Probable isomerase {ECO:0000313|EMBL:EDP65003.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
PLM3_60_coex_sep16_scaffold_53_26
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23294..23899
DNA (606bp) protein (202aa)
Glutathione S-transferase domain-containing protein Tax=Oceanibaculum indicum P24 RepID=K2JTU8_9PROT
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EKE73814.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_53_27
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23908..24336
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWW3_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACJ00787.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_53_28
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24433..25182
DNA (750bp) protein (250aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y231_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP38854.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_coex_sep16_scaffold_53_29
Saccharomonospora cyanea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25275..25994
DNA (720bp) protein (240aa)
2-haloalkanoic acid dehalogenase, type II Tax=Saccharomonospora cyanea NA-134 RepID=H5XED9_9PSEU
2-haloalkanoic acid dehalogenase, type II {ECO:0000313|EMBL:EHR61407.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora cyanea NA-134.;"
hydrolase
PLM3_60_coex_sep16_scaffold_53_30
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26004..26372)
DNA (369bp) protein (123aa)
Uncharacterized protein {ECO:0000313|EMBL:CDH43151.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
Displaying items 1-30 of 86 in total

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