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PLM3_60_coex_sep16_scaffold_164

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_164_1
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(173..2209)
DNA (2037bp) protein (679aa)
Putative integral membrane protein Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KF67_MESAW
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AGB43165.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
PLM3_60_coex_sep16_scaffold_164_2
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3067..3966)
DNA (900bp) protein (300aa)
hydrolase Tax=Leucothrix mucor RepID=UPI0003B597CF
Putative amidohydrolase {ECO:0000313|EMBL:AKI01417.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
hydrolase
PLM3_60_coex_sep16_scaffold_164_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4181..5116)
DNA (936bp) protein (312aa)
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EKE69508.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EKE69508.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain amino acid aminotransferase Tax=Oceanibaculum indicum P24 RepID=K2J335_9PROT
PLM3_60_coex_sep16_scaffold_164_4
Oceanithermus profundus, Oceanithermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(5197..6180)
DNA (984bp) protein (328aa)
hypothetical protein Tax=Bradyrhizobium japonicum RepID=UPI00036CD47C
pyridoxal-5'-phosphate-dependent protein beta subunit
Pyridoxal-5'-phosphate-dependent protein beta subunit {ECO:0000313|EMBL:ADR35848.1}; species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
PLM3_60_coex_sep16_scaffold_164_5
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6185..7312)
DNA (1128bp) protein (376aa)
FAD-dependent oxidoreductase Tax=Azospirillum sp. (strain B510) RepID=D3P3W8_AZOS1
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:BAI75347.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
PLM3_60_coex_sep16_scaffold_164_6
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7373..8752)
DNA (1380bp) protein (460aa)
Multidrug resistance protein NorM, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISP5_RHOCS
norM; multidrug resistance protein NorM, putative
Multidrug resistance protein NorM, putative {ECO:0000313|EMBL:ACI98481.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_164_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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8913..9038
DNA (126bp) protein (42aa)
50S ribosomal protein L36 Tax=alpha proteobacterium BAL199 RepID=A8TMC0_9PROT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
rpmJ; 50S ribosomal protein L36
PLM3_60_coex_sep16_scaffold_164_8
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9211..10698
DNA (1488bp) protein (496aa)
D-lactate dehydrogenase Tax=Oceanibaculum indicum P24 RepID=K2J2T2_9PROT
D-lactate dehydrogenase {ECO:0000313|EMBL:EKE69408.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
glcD; glycolate oxidase, subunit GlcD
PLM3_60_coex_sep16_scaffold_164_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10719..12011
DNA (1293bp) protein (431aa)
FAD linked oxidase domain-containing protein Tax=Oceanibaculum indicum P24 RepID=K2JFI9_9PROT
FAD linked oxidase domain-containing protein {ECO:0000313|EMBL:EKE69409.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
glcE; glycolate oxidase, subunit GlcE
PLM3_60_coex_sep16_scaffold_164_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12239..13531
DNA (1293bp) protein (431aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JW03_9PROT
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_164_11
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13741..15048
DNA (1308bp) protein (436aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2J5G4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE78281.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_164_12
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15109..16629
DNA (1521bp) protein (507aa)
Uncharacterized protein Tax=Thalassospira profundimaris WP0211 RepID=K2LZ39_9PROT
Uncharacterized protein {ECO:0000313|EMBL:KJE33691.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_164_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16633..17784)
DNA (1152bp) protein (384aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2KCQ8_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_164_14
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17927..18445
DNA (519bp) protein (173aa)
FOG: tpr repeat-protein Tax=uncultured Chromatiales bacterium HF0200_41F04 RepID=E0XV62_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGM44350.1}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
tetratricopeptide TPR_2
PLM3_60_coex_sep16_scaffold_164_15
Mesorhizobium sp. L103C131B0, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18591..19148
DNA (558bp) protein (186aa)
UPI0003CE4C27 related cluster Tax=unknown RepID=UPI0003CE4C27
Chloramphenicol phosphotransferase {ECO:0000313|EMBL:ESZ58860.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L103C131B0.;"
Chloramphenicol phosphotransferase family protein
PLM3_60_coex_sep16_scaffold_164_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19252..19875)
DNA (624bp) protein (208aa)
Putative Lysine exporter protein (LYSE/YGGA) Tax=Mesorhizobium metallidurans STM 2683 RepID=M5ET31_9RHIZ
Putative Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:CCV07148.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
lysine exporter protein LysE/YggA
PLM3_60_coex_sep16_scaffold_164_17
unknown

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comp(20025..20216)
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_164_18
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20439..21248
DNA (810bp) protein (270aa)
Uncharacterized protein Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVH5_ACCPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV36448.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM3_60_coex_sep16_scaffold_164_19
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(21283..23514)
DNA (2232bp) protein (744aa)
Adenylate cyclase Tax=Rhizobium fredii (strain HH103) RepID=G9AJN4_RHIFH
putative adenylate class-3/4/guanylyl cyclase
Putative adenylate class-3/4/guanylyl cyclase {ECO:0000313|EMBL:AHK44646.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
PLM3_60_coex_sep16_scaffold_164_20
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

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comp(23596..25620)
DNA (2025bp) protein (675aa)
Putative molybdopterin oxidoreductase Tax=Hyphomicrobium sp. (strain MC1) RepID=F8J7U9_HYPSM
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
PLM3_60_coex_sep16_scaffold_164_21
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25717..28791)
DNA (3075bp) protein (1025aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI00037A4456
AcrB {ECO:0000313|EMBL:ACI97730.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
AcrB protein
PLM3_60_coex_sep16_scaffold_164_22
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28809..29939)
DNA (1131bp) protein (377aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI000372E551
HlyD family secretion protein
HlyD family secretion protein {ECO:0000313|EMBL:ACI97729.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_164_23
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30581..33205
DNA (2625bp) protein (875aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZY7_9PROT
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDK98800.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
PLM3_60_coex_sep16_scaffold_164_24
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33202..34620)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
pyk; pyruvate kinase (EC:2.7.1.40)
Pyruvate kinase Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITY6_RHOCS
PLM3_60_coex_sep16_scaffold_164_25
unknown

Not on your lists

comp(35040..35699)
DNA (660bp) protein (220aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_164_26
Arenimonas oryziterrae, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36106..37140)
DNA (1035bp) protein (345aa)
L-threonine 3-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053}; EC=1.1.1.103 {ECO:0000256|HAMAP-Rule:MF_00627, ECO:0000256|SAAS:SAAS00056053};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas oryziterrae DSM 21050 = YC6267.;"
L-threonine 3-dehydrogenase (EC:1.1.1.103)
L-threonine 3-dehydrogenase Tax=Dyella ginsengisoli RepID=UPI000379D32E
PLM3_60_coex_sep16_scaffold_164_27
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37433..37687
DNA (255bp) protein (85aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI000369820B
Putative uncharacterized protein {ECO:0000313|EMBL:EHK57406.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_164_28
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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comp(37768..38577)
DNA (810bp) protein (270aa)
Peptidase S1 and S6, chymotrypsin/Hap bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
peptidase S1 and S6, chymotrypsin/Hap
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_164_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(38746..39675)
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHF2_AZOL4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
PLM3_60_coex_sep16_scaffold_164_30
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(39694..40377)
DNA (684bp) protein (228aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFJ9_ANADF
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:CDM64161.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HAD family hydrolase
Displaying items 1-30 of 91 in total

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