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PLM3_60_coex_sep16_scaffold_453

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_453_1
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(209..1708)
DNA (1500bp) protein (500aa)
Endonuclease/exonuclease/phosphatase family protein Tax=Paenibacillus alvei TS-15 RepID=S9TPC2_PAEAL
endonuclease/exonuclease/phosphatase
Tax=RBG_16_Euryarchaeota_67_27_curated
PLM3_60_coex_sep16_scaffold_453_2
marine gamma proteobacterium HTCC2080, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1977..3203)
DNA (1227bp) protein (409aa)
Rieske 2Fe-2S family protein Tax=marine gamma proteobacterium HTCC2080 RepID=A0Z6V4_9GAMM
Rieske 2Fe-2S family protein {ECO:0000313|EMBL:EAW40332.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2080.;"
Rieske (2Fe-2S) protein
PLM3_60_coex_sep16_scaffold_453_3
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3223..3873)
DNA (651bp) protein (217aa)
TetR family transcriptional regulator Tax=Oceanibaculum indicum P24 RepID=K2JM43_9PROT
TetR family transcriptional regulator {ECO:0000313|EMBL:EKE76398.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
TetR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_453_4
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4090..4833
DNA (744bp) protein (248aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003625D2D
Putative uncharacterized protein {ECO:0000313|EMBL:EFM11318.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus curdlanolyticus YK9.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_453_5
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4846..5649
DNA (804bp) protein (268aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037105A8
L-proline 4-hydroxylase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_453_6
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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5659..7032
DNA (1374bp) protein (458aa)
SAF domain protein Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HEZ6_ANADF
SAF domain-containing protein
Tax=RBG_16_Gamma2_60_9_curated
PLM3_60_coex_sep16_scaffold_453_7
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7038..7322)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=Azospirillum sp. (strain B510) RepID=D3NVF3_AZOS1
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_453_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7378..8469
DNA (1092bp) protein (364aa)
pfk; 6-phosphofructokinase (EC:2.7.1.11)
6-phosphofructokinase {ECO:0000313|EMBL:BAI72381.1}; EC=2.7.1.11 {ECO:0000313|EMBL:BAI72381.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
6-phosphofructokinase Tax=Azospirillum sp. (strain B510) RepID=D3NVF2_AZOS1
PLM3_60_coex_sep16_scaffold_453_9
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..9008
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2IQG9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE72451.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_453_10
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9075..9710)
DNA (636bp) protein (212aa)
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
ubiX; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase (EC:4.1.1.-)
Probable aromatic acid decarboxylase Tax=marine gamma proteobacterium HTCC2143 RepID=A0YH42_9GAMM
PLM3_60_coex_sep16_scaffold_453_11
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9832..10011
DNA (180bp) protein (60aa)
hypothetical protein Tax=Kordiimonas gwangyangensis RepID=UPI00037CA737
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
PLM3_60_coex_sep16_scaffold_453_12
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10180..10599
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Rhizobium freirei PRF 81 RepID=N6U011_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN85989.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative uncharacterized protein
PLM3_60_coex_sep16_scaffold_453_13

Not on your lists

10621..11049
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3UBF0_CROAH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKO00836.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_453_14
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11046..12227)
DNA (1182bp) protein (394aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS79.;"
2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate CoA ligase Tax=Xanthomonas axonopodis RepID=UPI00031BC85A
PLM3_60_coex_sep16_scaffold_453_15
Saimiriine herpesvirus 2, Rhadinovirus, Herpesvirales, Viruses

Not on your lists

comp(12378..13262)
DNA (885bp) protein (295aa)
Transcriptional regulator ICP22 homolog Tax=Saimiriine herpesvirus 2 (strain 11) RepID=ICP22_SHV21
Uncharacterized protein {ECO:0000313|EMBL:CAC84371.1}; species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus.;" source="Saimiriine herpesvirus 2 (SaHV-2) (Herpesvirus saimiri).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_453_16
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13551..14012
DNA (462bp) protein (154aa)
hypothetical protein Tax=Methylocystis rosea RepID=UPI00037064E4
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_453_17
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14032..14565
DNA (534bp) protein (178aa)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_453_18
GWF2_Lentisphaerae_45_14_curated, Lentisphaerae, Bacteria

Not on your lists

14562..15272
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Luminiphilus syltensis NOR5-1B RepID=B8KVG4_9GAMM
hypothetical protein
Tax=GWF2_Lentisphaerae_45_14_curated
PLM3_60_coex_sep16_scaffold_453_19
unknown

Not on your lists

comp(15310..15510)
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_453_20
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15636..16880
DNA (1245bp) protein (415aa)
LysR family transcriptional regulator Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y8N2_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:EHH11887.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_453_21
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16816..17382)
DNA (567bp) protein (189aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TWY3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62919.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
Mlr8238 protein
PLM3_60_coex_sep16_scaffold_453_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17542..18387)
DNA (846bp) protein (282aa)
Alpha/beta hydrolase fold Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07I22_RHOP5
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold {ECO:0000313|EMBL:ABJ08412.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
PLM3_60_coex_sep16_scaffold_453_23
unknown

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comp(18561..18746)
DNA (186bp) protein (62aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_453_24
unknown

Not on your lists

comp(18777..19172)
DNA (396bp) protein (132aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_453_25
unknown

Not on your lists

comp(19279..19575)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_453_26
unknown

Not on your lists

19712..20245
DNA (534bp) protein (178aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_453_27
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20264..20575)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Microvirga sp. WSM3557 RepID=I4YY18_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EIM28860.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_453_28
R_Gammaproteobacteria_40_19, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20725..21024)
DNA (300bp) protein (100aa)
Periplasmic glucan biosynthesis protein, MdoG Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VC18_SPHWW
mdoG; glucan biosynthesis protein G
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_40_19_curated
PLM3_60_coex_sep16_scaffold_453_29
unknown

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comp(21021..21512)
DNA (492bp) protein (164aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_453_30
Oscillatoria nigro-viridis, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21964..23490)
DNA (1527bp) protein (509aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI0003475926
putative phenylacetate-CoA ligase
Putative phenylacetate-CoA ligase {ECO:0000313|EMBL:AFZ08231.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria nigro-viridis PCC 7112.;"
Displaying items 1-30 of 64 in total

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