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PLM3_60_coex_sep16_scaffold_454_25

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 21878..22363

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 150.0
  • Bit_score: 181
  • Evalue 9.10e-43
Peptide deformylase Tax=Rhodospirillum rubrum RepID=G2TE88_RHORU similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 150.0
  • Bit_score: 181
  • Evalue 6.50e-43
peptide deformylase similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 150.0
  • Bit_score: 181
  • Evalue 1.80e-43

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Taxonomy

Rhodospirillum rubrum → Rhodospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 486
ATGCTGGAGACCCTCGCCGATATCGGCGGCATCGGATTGGCCGCACCCCAGGTGCATGTGTCCAAGCGGGTGGTGATTTTCGAGGTCCCAGCCGCCCGGGCGGGCCGCGAATCGGCCGACGGCGAGGCGCCCGCCGGGACGCCCATGACGGTGCTGATCAATCCGGTGATCGAACCCCTGAGCGAGGCCAAGGCCGACGGCTGGGAGGCCTGCCTCTCGGTGCCCGGCCTGACCGGCCTGGTGCCGCGCTACACCCATATCCGCTATAGCGGCTATGATTTCCTGGGCAAGCGGATCGAGCGCGAAGCCCGCGACTTTCATGCCCGGGTGGTGCAGCATGAATGCGATCATCTCGATGGCGTGCTCTATCCCCTGCGCATGACCGATCTCACCAAGCTCTCCTTCATGGAGGAGATGCGCTATCGTGCCGCGGCGGGCGAGGCGGCGCCGACCGAGAAGGAACTCGAGGAACTGGCGGAGGGCTGA
PROTEIN sequence
Length: 162
MLETLADIGGIGLAAPQVHVSKRVVIFEVPAARAGRESADGEAPAGTPMTVLINPVIEPLSEAKADGWEACLSVPGLTGLVPRYTHIRYSGYDFLGKRIEREARDFHARVVQHECDHLDGVLYPLRMTDLTKLSFMEEMRYRAAAGEAAPTEKELEELAEG*