ggKbase home page

PLM3_60_coex_sep16_scaffold_107_10

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: comp(9561..10562)

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxyproline epimerase (EC:5.1.1.8) similarity KEGG
DB: KEGG
  • Identity: 73.0
  • Coverage: 333.0
  • Bit_score: 514
  • Evalue 1.40e-143
4-hydroxyproline 2-epimerase {ECO:0000303|PubMed:25608448}; Short=4Hyp 2-epimerase;; Short=4HypE {ECO:0000303|PubMed:25608448};; EC=5.1.1.8 {ECO:0000269|PubMed:25608448};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 333.0
  • Bit_score: 514
  • Evalue 7.20e-143
hydroxyproline-2-epimerase Tax=Xanthobacteraceae RepID=UPI000365E2BB similarity UNIREF
DB: UNIREF100
  • Identity: 74.2
  • Coverage: 333.0
  • Bit_score: 522
  • Evalue 1.90e-145

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Starkeya novella → Starkeya → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
ATGAATCCCCACACGTTTTTCTGCATCGACGCCCACACCTGCGGCAATCCCGTGCGCGTGGTGGCGGGCGGCACGCCGGCCCTGGTGGGCGCCAGCTCGAGCGAGCGGCGGCAGTATTTCCTGAAGCATTACGATTGGATTCGCACCGGGCTGATGTTCGAGCCGCGCGGGCACGACATGATGTCGGGCAGCATCCTCTATCCGCCGACCCGGCCCGATTGCGACAGCGGCATTCTGTTCATCGAGACCAGCGGCTGCCTGCCGATGTGCGGCCATGGCACGATCGGCACGGTCACGGTGGCGATCGAGCGCGGGCTGGTGCAGCCGAAGACCGAGGGCGTGCTGAAGCTGGATGCGCCGGCCGGCGTGGTGGAGGCGACCTACAAGCGCGACGGCGAGTATGTGGATTCGGTCCGCATCAAGAACGTCGCGTCCTACCTCCACGGCTCGGGCGTGACGGTGGATTGCCCCGGCATTGGCGAGCTCTCCTTCGACATCGCCTATGGCGGGAATTTCTACGCCATCCTGGAGCCGCAGAAGAATTACCGGGACATGGCCGATTTCCCGCCCGGCGAGATCCAGCGGCTGTCGCTGATCCTGCGCCGGCTGCTGAACGAGAAGGTCGAGTGCGTGCATCCGGAGAATTCGACGATCCGCGGCGTCAGCCACATCTTGTGGACCGGCAAGGCGGTCAACCCGAAGGCCCATGCCCGCAACGCCGTGTTCTATGGCGACAAGGCGATCGACCGCAGCCCCTGCGGCACGGGCACCTCGGCGCGGATGGCGCATCTGGCGGCGAAGGGGAAGCTGAAGGTCGGCGACGATTTCGTCCACGAGAGCATCATCGGCAGCCTGTTCAACGGCCGGATCGAGGCCAAGGCCAAGGTGGGCAACCACGAGGCGATCATCCCCTCGATCGAAGGCTGGGCCCGCATCACCGGCTTCAACACGATCTTCATCGACGACCGCGATCCGTATAAGCACGGCTTCCAGGTAGTCTGA
PROTEIN sequence
Length: 334
MNPHTFFCIDAHTCGNPVRVVAGGTPALVGASSSERRQYFLKHYDWIRTGLMFEPRGHDMMSGSILYPPTRPDCDSGILFIETSGCLPMCGHGTIGTVTVAIERGLVQPKTEGVLKLDAPAGVVEATYKRDGEYVDSVRIKNVASYLHGSGVTVDCPGIGELSFDIAYGGNFYAILEPQKNYRDMADFPPGEIQRLSLILRRLLNEKVECVHPENSTIRGVSHILWTGKAVNPKAHARNAVFYGDKAIDRSPCGTGTSARMAHLAAKGKLKVGDDFVHESIIGSLFNGRIEAKAKVGNHEAIIPSIEGWARITGFNTIFIDDRDPYKHGFQVV*