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PLM3_60_coex_sep16_scaffold_107

Search features with annotation key words

Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_107_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(568..1245)
DNA (678bp) protein (226aa)
Glutathione S-transferase Tax=Rhizobium leguminosarum bv. trifolii WSM2297 RepID=J0WHX1_RHILT
Glutathione S-transferase {ECO:0000313|EMBL:EJC85636.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
glutathione S-transferase
PLM3_60_coex_sep16_scaffold_107_2
unknown

Not on your lists

comp(1382..1804)
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_107_3
Hyphomonas chukchiensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1840..2403)
DNA (564bp) protein (188aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI000380F552
Uncharacterized protein {ECO:0000313|EMBL:KCZ58970.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas chukchiensis.;"
metal-dependent protein of the double-stranded beta helix superfamily-like protein
PLM3_60_coex_sep16_scaffold_107_4
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2530..3471
DNA (942bp) protein (314aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00037B26BD
Uncharacterized protein {ECO:0000313|EMBL:KGT79340.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
LysR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_107_5
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3745..4674)
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8U184_9PROT
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
PLM3_60_coex_sep16_scaffold_107_6
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4880..6853
DNA (1974bp) protein (658aa)
Putative integral membrane protein Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KF67_MESAW
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:AGB43165.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
PLM3_60_coex_sep16_scaffold_107_7
Hyphomicrobium denitrificans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7048..7920
DNA (873bp) protein (291aa)
ISSpo3, transposase Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B819_9RHIZ
ISSpo3, transposase
ISSpo3, transposase {ECO:0000313|EMBL:AGK59163.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;"
PLM3_60_coex_sep16_scaffold_107_8
R_Betaproteobacteria_68_150, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8270..8785)
DNA (516bp) protein (172aa)
Putative uncharacterized protein Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I8H9_RHOVT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_68_150_curated
PLM3_60_coex_sep16_scaffold_107_9
unknown

Not on your lists

8957..9190
DNA (234bp) protein (78aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_107_10
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9561..10562)
DNA (1002bp) protein (334aa)
4-hydroxyproline epimerase (EC:5.1.1.8)
4-hydroxyproline 2-epimerase {ECO:0000303|PubMed:25608448}; Short=4Hyp 2-epimerase;; Short=4HypE {ECO:0000303|PubMed:25608448};; EC=5.1.1.8 {ECO:0000269|PubMed:25608448};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
hydroxyproline-2-epimerase Tax=Xanthobacteraceae RepID=UPI000365E2BB
PLM3_60_coex_sep16_scaffold_107_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10701..11519
DNA (819bp) protein (273aa)
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8ANK1_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KGM34473.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
N-formylglutamate amidohydrolase
PLM3_60_coex_sep16_scaffold_107_12
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11526..12656
DNA (1131bp) protein (377aa)
Putative glutamate--cysteine ligase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase 2 {ECO:0000256|HAMAP-Rule:MF_01609}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
Carboxylate-amine ligase C882_0004 Tax=Caenispirillum salinarum AK4 RepID=K9HXK1_9PROT
hypothetical protein
PLM3_60_coex_sep16_scaffold_107_13
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12725..13018
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=Lutibaculum baratangense AMV1 RepID=V4RAA3_9RHIZ
Alkaline phosphatase {ECO:0000313|EMBL:KJV08685.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_107_14
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13127..13375
DNA (249bp) protein (83aa)
UPF0335 protein AZOBR_100079 Tax=Azospirillum brasilense Sp245 RepID=G8AKD1_AZOBR
conserved protein of unknown function; putative coiled-coil domain
UPF0335 protein ABAZ39_09140 {ECO:0000256|HAMAP-Rule:MF_00797}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_107_15
BJP_08E140C01_Coriobacteriales_62_12, Coriobacteriales, Coriobacteridae, Actinobacteria, Bacteria

Not on your lists

13419..14318
DNA (900bp) protein (300aa)
Permease of the drug/metabolite transporter (DMT) superfamily Tax=Shinella zoogloeoides DD12 RepID=V5CZ80_9RHIZ
putative transmembrane protein
Tax=BJP_08E140C01_Coriobacteriales_62_12
PLM3_60_coex_sep16_scaffold_107_16
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14328..15353)
DNA (1026bp) protein (342aa)
Oligopeptide transport ATP-binding protein Op PF Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IWQ4_RHOCS
oppF; oligopeptide transport ATP-binding protein Op PF
Oligopeptide transport ATP-binding protein Op PF {ECO:0000313|EMBL:ACJ00728.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_107_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15332..16354)
DNA (1023bp) protein (341aa)
hypothetical protein Tax=Novispirillum itersonii RepID=UPI0003634979
Oligopeptide transporter ATP-binding component {ECO:0000313|EMBL:KGM35953.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
oppD; oligopeptide transport ATP-binding protein OppD
PLM3_60_coex_sep16_scaffold_107_18
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16359..17255)
DNA (897bp) protein (299aa)
peptide ABC transporter permease Tax=Hahella ganghwensis RepID=UPI00035CBD4B
Peptide ABC transporter permease {ECO:0000313|EMBL:KEI69452.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola.;"
dipeptide/oligopeptide/nickel ABC transporter permease
PLM3_60_coex_sep16_scaffold_107_19
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17262..18179)
DNA (918bp) protein (306aa)
ABC transporter Tax=Kushneria aurantia RepID=UPI00035DFDA8
ABC transporter {ECO:0000313|EMBL:KJB92360.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_107_20
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18288..19886)
DNA (1599bp) protein (533aa)
ABC-type transporter, periplasmic subunit Tax=Thiothrix nivea DSM 5205 RepID=I3C001_9GAMM
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EWY39256.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
oligopeptide ABC transporter periplasmic oligopeptide-binding protein
PLM3_60_coex_sep16_scaffold_107_21
Synechococcus sp. WH 5701, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

20156..20998
DNA (843bp) protein (281aa)
Uncharacterized protein Tax=Synechococcus sp. WH 5701 RepID=A3YUI8_9SYNE
Uncharacterized protein {ECO:0000313|EMBL:EAQ76704.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. WH 5701.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_107_22
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20995..21762)
DNA (768bp) protein (256aa)
GntR family transcriptional regulator Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLM7_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:EHK58425.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_107_23
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21778..22773)
DNA (996bp) protein (332aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI00037CC255
Inner-membrane translocator {ECO:0000313|EMBL:EHK58426.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
inner-membrane translocator
PLM3_60_coex_sep16_scaffold_107_24
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22814..23554)
DNA (741bp) protein (247aa)
ABC transporter ATP-binding protein Tax=Rhizobium sp. (strain BR816) RepID=UPI000362EF9F
ABC transporter related protein {ECO:0000313|EMBL:CDX12672.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
sugar ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_107_25
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23980..24966
DNA (987bp) protein (329aa)
Periplasmic sugar-binding protein of sugar ABC transporter Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HLN0_9RHIZ
Periplasmic sugar-binding protein of sugar ABC transporter {ECO:0000313|EMBL:EHK58428.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
Putative sugar (D-ribose) ABC transporter (Periplasmic binding protein)
PLM3_60_coex_sep16_scaffold_107_26
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(25086..25991)
DNA (906bp) protein (302aa)
Transcriptional regulator, LysR family protein Tax=alpha proteobacterium BAL199 RepID=A8TN53_9PROT
transcriptional Regulator, LysR family
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_107_27
unknown

Not on your lists

26138..26506
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_107_28
Rhodospirillum rubrum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27017..27355
DNA (339bp) protein (113aa)
Nitrogen regulatory protein P-II Tax=Rhodospirillum rubrum RepID=G2TEY3_RHORU
nitrogen regulatory protein P-II
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:ABC21931.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG; 4362 / NCIB 8255 / S1).;"
PLM3_60_coex_sep16_scaffold_107_29
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27368..28690
DNA (1323bp) protein (441aa)
Ammonia channel (Ammonia transporter) Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CN34_THIA3
amtB; Ammonia channel precursor (Ammonia transporter)
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_107_30
RBG_13_Planctomycetes_63_9_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28793..29074)
DNA (282bp) protein (94aa)
Tax=RBG_13_Planctomycetes_63_9_curated
Displaying items 1-30 of 53 in total

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