ggKbase home page

PLM3_60_coex_sep16_scaffold_50_16

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: comp(14839..15594)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR, 3-oxoacyl-[acyl-carrier-protein] reductase-like protein bin=CD_OP8_4m species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes) similarity UNIREF
DB: UNIREF100
  • Identity: 50.8
  • Coverage: 254.0
  • Bit_score: 245
  • Evalue 3.30e-62
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 249.0
  • Bit_score: 230
  • Evalue 3.10e-58
Tax=BJP_IG2157_Anaerolineales_55_23 similarity UNIPROT
DB: UniProtKB
  • Identity: 52.2
  • Coverage: 255.0
  • Bit_score: 252
  • Evalue 3.80e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

BJP_IG2157_Anaerolineales_55_23 → Anaerolineales → Anaerolineae → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 756
ATGCGGCTCGACGGAAAAGCCATGCTGGTCACCGGCGCCACCTCGGGCATCGGCGCGGCGATCGCGCTCGAAGCGGCCAGCGAGGGCGCGCGCCTCCTCCTGACCGGCCGCTCCGCGGGGCGCGGCGAAGATATCCGCCGGCAATGCGGCGGCGAAGCGGTCTTTGTCGCCGCCGATGTCACCGAGAAGGGCGTGGCGGAGCGGCTCGTGGACGCGGCGGTCAAGCAGTTCGGCCGCCTCGATATTCTCGTCAACAATGCCGGCATCGTTCACCGGCACACGGCCGAAACCGCGACCGACCAGGAATGGGACGACGTCATCTCGGTGAACGTCACCAGCGTCTTCCGCATGAGCCGCGCGGCGCTGCCCCAGATGAAGCGCCAGGGCGGCGGCACGATCATCAACATCGGGTCGGATTGGGCCCTGGTGGGCGGCCGCAACGCCTTCGCCTATTGCGCCAGCAAGGGCGCCGTCGCGCAGATGACCCGCGCCATGGCCGTCGATCACGCCCGCGACAACATCCGCGTCAATTGCATCTGCCCCGGCGATATCGACACGCCGATGCTGGCTTCGGGCATCGCCAAGCGCGGCATGACGCAAGAACAGGGATTGAAACACCTCGCCGATCAGATTCCCATGGGCCGGGTGGCGCAGCCGCGGGAGATCGGCCGCGCCGCCGTCTTCCTGGCCTCGGCGGATTCCTCCTTCATGACCGGTGCGATGCTGTCGGTCGATGGCGGCAGCACCGCGGCCTGA
PROTEIN sequence
Length: 252
MRLDGKAMLVTGATSGIGAAIALEAASEGARLLLTGRSAGRGEDIRRQCGGEAVFVAADVTEKGVAERLVDAAVKQFGRLDILVNNAGIVHRHTAETATDQEWDDVISVNVTSVFRMSRAALPQMKRQGGGTIINIGSDWALVGGRNAFAYCASKGAVAQMTRAMAVDHARDNIRVNCICPGDIDTPMLASGIAKRGMTQEQGLKHLADQIPMGRVAQPREIGRAAVFLASADSSFMTGAMLSVDGGSTAA*