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PLM3_60_coex_sep16_scaffold_50

Search features with annotation key words

Displaying items 1-30 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_50_1
unknown

Not on your lists

3..182
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_50_2
unknown

Not on your lists

comp(763..888)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_50_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(916..1995)
DNA (1080bp) protein (360aa)
Putative multimeric flavodoxin WrbA family protein Tax=Rhizobium sp. RepID=L0NHG9_RHISP
NADPH-dependent FMN reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_50_4
Lysobacter capsici, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1992..2438)
DNA (447bp) protein (149aa)
Uncharacterized protein Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KIP6_9GAMM
Lactoylglutathione lyase {ECO:0000313|EMBL:EYR67554.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter capsici AZ78.;"
lactoylglutathione lyase
PLM3_60_coex_sep16_scaffold_50_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2459..2887)
DNA (429bp) protein (143aa)
Glyoxalase/bleomycin resistance protein/dioxygenase Tax=Azospirillum brasilense Sp245 RepID=G8AF25_AZOBR
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CCC96374.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_60_coex_sep16_scaffold_50_6
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2935..4221)
DNA (1287bp) protein (429aa)
Gamma-Glu-putrescine oxidase,FAD/NAD(P)-binding Tax=Azospirillum brasilense Sp245 RepID=G8ALX9_AZOBR
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:AIB11713.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_50_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4374..5249
DNA (876bp) protein (292aa)
hypothetical protein Tax=Eudoraea adriatica RepID=UPI00037560B1
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_50_8
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5432..6781
DNA (1350bp) protein (450aa)
Glutamine synthetase, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IMX2_RHOCS
glutamine synthetase
Glutamine synthetase, putative {ECO:0000313|EMBL:ACI98869.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_50_9
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6823..7770
DNA (948bp) protein (316aa)
Membrane protein Tax=Rhodobacter sp. CACIA14H1 RepID=V7EIP8_9RHOB
Membrane protein {ECO:0000313|EMBL:ESW60027.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_50_10
unknown

Not on your lists

comp(8522..8773)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_50_11
Micavibrio aeruginosavorus, Micavibrio, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8795..10237)
DNA (1443bp) protein (481aa)
Radical SAM superfamily protein Tax=Micavibrio aeruginosavorus (strain ARL-13) RepID=G2KPH7_MICAA
radical SAM superfamily protein
Radical SAM superfamily protein {ECO:0000313|EMBL:AEP09477.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Micavibrio.;" source="Micavibrio aeruginosavorus (strain ARL-13).;"
PLM3_60_coex_sep16_scaffold_50_12
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10224..10967)
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0RX69_9BRAD
Prolipoprotein diacylglyceryl transferase {ECO:0000313|EMBL:KIL97595.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_50_13
Pseudomonas sp. GM41(2012), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11318..12700
DNA (1383bp) protein (461aa)
Adenosylmethionine--8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:EUB73233.1}; EC=2.6.1.62 {ECO:0000313|EMBL:EUB73233.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM41(2012).;"
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase Tax=Pseudomonas sp. GM41(2012) RepID=J3G2K9_9PSED
putative aminotransferase
PLM3_60_coex_sep16_scaffold_50_14
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12851..13744
DNA (894bp) protein (298aa)
N-carbamoylputrescine amidase Tax=Azospirillum brasilense Sp245 RepID=G8ALH1_AZOBR
Carbon-nitrogen family hydrolase {ECO:0000313|EMBL:EWY38832.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
aguB; N-carbamoylputrescine amidase
PLM3_60_coex_sep16_scaffold_50_15
BJP_IG2103_ACD39_50_23, ACD39, Bacteria

Not on your lists

13741..14838
DNA (1098bp) protein (366aa)
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=Coleofasciculus chthonoplastes genus=Coleofasciculus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_ACD39_50_8 organism_group=ACD39
Endonuclease/exonuclease/phosphatase
Tax=BJP_IG2103_ACD39_50_23
PLM3_60_coex_sep16_scaffold_50_16
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14839..15594)
DNA (756bp) protein (252aa)
Short-chain dehydrogenase/reductase SDR, 3-oxoacyl-[acyl-carrier-protein] reductase-like protein bin=CD_OP8_4m species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
short-chain dehydrogenase/reductase SDR
Tax=BJP_IG2157_Anaerolineales_55_23
PLM3_60_coex_sep16_scaffold_50_17
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15662..16492)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 375 RepID=H0SDZ9_9BRAD
Transglycosylase {ECO:0000313|EMBL:KGT76784.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
transglycosylase
PLM3_60_coex_sep16_scaffold_50_18
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16772..18454)
DNA (1683bp) protein (561aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
formate--tetrahydrofolate ligase Tax=Fodinicurvata sediminis RepID=UPI0003B51A00
formate--tetrahydrofolate ligase
PLM3_60_coex_sep16_scaffold_50_19

Not on your lists

comp(18906..20213)
DNA (1308bp) protein (436aa)
Glutamine synthetase Tax=uncultured bacterium HF770_09N20 RepID=E0XPT4_9BACT
glutamine synthetase
Glutamine synthetase {ECO:0000313|EMBL:ADI16425.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium HF770_09N20.;"
PLM3_60_coex_sep16_scaffold_50_20
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20296..21645)
DNA (1350bp) protein (450aa)
glutamate synthase family protein (EC:2.1.1.21)
Glutamate synthase family protein Tax=alpha proteobacterium HIMB59 RepID=J9Z0Y6_9PROT
Glutamate synthase {ECO:0000313|EMBL:ETX01096.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
PLM3_60_coex_sep16_scaffold_50_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(21645..23033)
DNA (1389bp) protein (463aa)
glutamate synthase subunit alpha domain-containing protein (EC:1.2.99.5)
Putative C-terminal domain of alpha subunit of Glutamate synthase putative formyl-methanofuran dehydrogenase Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4Z072_BRASO
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_50_22
Pararhodospirillum photometricum, Pararhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23328..24035)
DNA (708bp) protein (236aa)
Putative HTH-type transcriptional regulator Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLE4_RHOPH
Putative HTH-type transcriptional regulator
Putative HTH-type transcriptional regulator {ECO:0000313|EMBL:CCG08809.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Pararhodospirillum.;" source="Rhodospirillum photometricum DSM 122.;"
PLM3_60_coex_sep16_scaffold_50_23
Gammaproteobacteria bacterium MOLA455, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24106..24657)
DNA (552bp) protein (184aa)
Sarcosine oxidase, gamma subunit Tax=gamma proteobacterium HTCC2207 RepID=Q1YQA3_9GAMM
Sarcosine oxidase, gamma subunit family {ECO:0000313|EMBL:ETN92785.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="Gammaproteobacteria bacterium MOLA455.;"
sarcosine oxidase
PLM3_60_coex_sep16_scaffold_50_24
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24661..27576)
DNA (2916bp) protein (972aa)
aminomethyltransferase (EC:2.1.2.10)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, putative Tax=marine gamma proteobacterium HTCC2148 RepID=B7RV67_9GAMM
tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA, putative {ECO:0000313|EMBL:EEB79908.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
PLM3_60_coex_sep16_scaffold_50_25
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27573..27881)
DNA (309bp) protein (103aa)
soxD; sarcosine oxidase delta subunit (EC:1.5.3.1)
Sarcosine oxidase, delta subunit Tax=Marinomonas sp. MED121 RepID=A3YAI7_9GAMM
Sarcosine oxidase, delta subunit {ECO:0000313|EMBL:EAQ65823.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
PLM3_60_coex_sep16_scaffold_50_26
Hyphomicrobium nitrativorans, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27893..29134)
DNA (1242bp) protein (414aa)
Sarcosine oxidase subunit beta Tax=Hyphomicrobium nitrativorans NL23 RepID=V5SFP8_9RHIZ
sarcosine oxidase subunit beta
Sarcosine oxidase subunit beta {ECO:0000313|EMBL:AHB48850.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium nitrativorans NL23.;"
PLM3_60_coex_sep16_scaffold_50_27
Methyloceanibacter caenitepidi, Methyloceanibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29435..30031
DNA (597bp) protein (199aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA001-C10 RepID=UPI000289F0CC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAQ18076.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methyloceanibacter.;" source="Methyloceanibacter caenitepidi.;"
PLM3_60_coex_sep16_scaffold_50_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30636..32495)
DNA (1860bp) protein (620aa)
adenylate/guanylate cyclase (EC:4.6.1.1)
guanylyl cyclase Tax=Rhizobium phaseoli RepID=UPI0002FB8817
Putative integral membrane protein {ECO:0000313|EMBL:EJC84261.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2297.;"
PLM3_60_coex_sep16_scaffold_50_29
Candidatus Phaeomarinobacter ectocarpi, Candidatus Phaeomarinobacter, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32889..33254
DNA (366bp) protein (122aa)
ArsR family transcriptional regulator Tax=Bradyrhizobium japonicum RepID=UPI0003713156
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CDO61040.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Candidatus Phaeomarinobacter.;" source="Candidatus Phaeomarinobacter ectocarpi.;"
ArsR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_50_30
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

33229..33717
DNA (489bp) protein (163aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000365A982
putative glutathione S-transferase-related transmembrane protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
Displaying items 1-30 of 211 in total

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