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PLM3_60_coex_sep16_scaffold_2987

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_2987_1
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(41..994)
DNA (954bp) protein (318aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRJ2_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34682.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2987_2
Propionibacterium propionicum, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(994..1371)
DNA (378bp) protein (126aa)
UPF0102 protein HMPREF9154_1328 Tax=Propionibacterium propionicum (strain F0230a) RepID=I6XQQ6_PROPF
hypothetical protein
UPF0102 protein HMPREF9154_1328 {ECO:0000256|HAMAP-Rule:MF_00048}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium propionicum (strain F0230a).;"
PLM3_60_coex_sep16_scaffold_2987_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1466..1777)
DNA (312bp) protein (104aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRJ0_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34680.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2987_4
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1827..2495)
DNA (669bp) protein (223aa)
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Ribonuclease HII Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI9_MICPN
PLM3_60_coex_sep16_scaffold_2987_5
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2495..3313)
DNA (819bp) protein (273aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Signal peptidase I Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI8_MICPN
PLM3_60_coex_sep16_scaffold_2987_6
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3310..4158)
DNA (849bp) protein (283aa)
signal peptidase I (EC:3.4.21.89)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Signal peptidase I Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI7_MICPN
PLM3_60_coex_sep16_scaffold_2987_7
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(4176..4529)
DNA (354bp) protein (118aa)
50S ribosomal protein L19 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI6_MICPN
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2987_8
Amycolicicoccus subflavus, Amycolicicoccus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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5048..5263
DNA (216bp) protein (72aa)
Fumarate reductase flavoprotein subunit {ECO:0000256|RuleBase:RU362050}; EC=1.3.5.4 {ECO:0000256|RuleBase:RU362050};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Amycolicicoccus.;" source="Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1).;"
Fumarate reductase flavoprotein subunit frdA Tax=Amycolicicoccus subflavus (strain DSM 45089 / DQS3-9A1) RepID=F6EKS7_AMYSD
frdA; fumarate reductase flavoprotein subunit frdA
PLM3_60_coex_sep16_scaffold_2987_9

Not on your lists

5272..6753
DNA (1482bp) protein (494aa)
fumarate reductase flavoprotein subunit Tax=Kribbella catacumbae RepID=UPI00035C6254
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:AKA59475.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
frdA; hypothetical protein
PLM3_60_coex_sep16_scaffold_2987_10

Not on your lists

6760..7497
DNA (738bp) protein (246aa)
Putative fumarate reductase Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WPE9_9NOCA
Succinate dehydrogenase iron-sulfur protein {ECO:0000313|EMBL:AKA59474.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium AZ_40.;"
frdBC; putative fumarate reductase
PLM3_60_coex_sep16_scaffold_2987_11
Mycobacterium canettii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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7497..7961
DNA (465bp) protein (155aa)
frdC; Putative fumarate reductase [membrane anchor subunit] FrdC (fumarate dehydrogenase) (fumaric hydrogenase) (EC:1.3.99.1)
Putative fumarate reductase [membrane anchor subunit] FRDC (Fumarate dehydrogenase) (Fumaric hydrogenase) Tax=Mycobacterium canettii RepID=G0TJD7_MYCCP
Fumarate reductase subunit C {ECO:0000256|SAAS:SAAS00095967}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacterium canettii (strain CIPT 140010059).;"
PLM3_60_coex_sep16_scaffold_2987_12
Rhodococcus imtechensis, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7984..8244
DNA (261bp) protein (87aa)
hypothetical protein Tax=Kribbella catacumbae RepID=UPI0003810A01
fumarate reductase subunit D
Fumarate reductase subunit D {ECO:0000313|EMBL:EID78267.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus imtechensis RKJ300 = JCM 13270.;"
PLM3_60_coex_sep16_scaffold_2987_13
Thermobifida fusca, Thermobifida, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8265..9065)
DNA (801bp) protein (267aa)
succinate dehydrogenase/fumarate reductase iron-sulfur subunit (EC:1.3.5.1)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Thermobifida.;" source="Thermobifida fusca (strain YX).;"
Succinate dehydrogenase subunit B Tax=Thermobifida fusca RepID=Q47M38_THEFY
PLM3_60_coex_sep16_scaffold_2987_14
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9062..11035)
DNA (1974bp) protein (658aa)
Succinate dehydrogenase flavoprotein subunit {ECO:0000313|EMBL:BAK34670.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAK34670.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1)
Succinate dehydrogenase flavoprotein subunit Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRI0_MICPN
PLM3_60_coex_sep16_scaffold_2987_15
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11070..11714)
DNA (645bp) protein (215aa)
sdhC; succinate dehydrogenase cytochrome b subunit (EC:1.3.99.1)
Succinate dehydrogenase cytochrome b subunit {ECO:0000313|EMBL:BAK34669.1}; EC=1.3.99.1 {ECO:0000313|EMBL:BAK34669.1};; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Succinate dehydrogenase cytochrome b subunit Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRH9_MICPN
PLM3_60_coex_sep16_scaffold_2987_16
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11950..12930)
DNA (981bp) protein (327aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014918}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|SAAS:SAAS00014917};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
tRNA (guanine-N(1)-)-methyltransferase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PZG7_KRIFD
PLM3_60_coex_sep16_scaffold_2987_17
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13097..13657)
DNA (561bp) protein (187aa)
Ribosome maturation factor RimM Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG8_MICPN
rimM; ribosome maturation factor RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2987_18
Propionibacterium acnes, Propionibacterium, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13692..13961)
DNA (270bp) protein (90aa)
UPF0109 protein HMPREF1162_0952 Tax=Propionibacterium acnes SK182B-JCVI RepID=F9NSF0_PROAA
UPF0109 protein HMPREF1162_0952 {ECO:0000256|HAMAP-Rule:MF_00088}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Propionibacterium.;" source="Propionibacterium acnes SK182B-JCVI.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_2987_19
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(13961..14455)
DNA (495bp) protein (165aa)
30S ribosomal protein S16 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG6_MICPN
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2987_20
Arthrobacter crystallopoietes, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14678..15055)
DNA (378bp) protein (126aa)
methylmalonyl-CoA epimerase (EC:5.1.99.1)
Methylmalonyl-CoA epimerase Tax=Arthrobacter crystallopoietes BAB-32 RepID=N1VBA1_9MICC
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EMY35588.1}; species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter crystallopoietes BAB-32.;"
PLM3_60_coex_sep16_scaffold_2987_21
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15128..15961)
DNA (834bp) protein (278aa)
Uncharacterized protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG3_MICPN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAK34653.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_2987_22
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15958..17319)
DNA (1362bp) protein (454aa)
Putative ABC transporter ATP-binding protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRG2_MICPN
ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAK34652.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Displaying 22 items

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