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PLM3_60_coex_sep16_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_33_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2..1567
DNA (1566bp) protein (522aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NG5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ88805.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_33_2
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1798..2499)
DNA (702bp) protein (234aa)
Protein containing DUF1061 Tax=Rhodopirellula sp. SWK7 RepID=M5T5V1_9PLAN
Protein containing DUF1061 {ECO:0000313|EMBL:EMI44490.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sp. SWK7.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_33_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

2696..3043
DNA (348bp) protein (116aa)
Putative Phage integrase Tax=Candidatus Nitrospira defluvii RepID=D8P8R6_9BACT
putative phage integrase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_coex_sep16_scaffold_33_4
unknown

Not on your lists

3583..3819
DNA (237bp) protein (79aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_33_5
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4873..5058
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_33_6
unknown

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comp(5172..5387)
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_33_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7014..8198)
DNA (1185bp) protein (395aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPK2_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8195..9382)
DNA (1188bp) protein (396aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAU6_GEMAT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

9432..10805
DNA (1374bp) protein (458aa)
Putative uncharacterized protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPK3_9BURK
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_60_coex_sep16_scaffold_33_10
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

10888..11523
DNA (636bp) protein (212aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035C5373
CnaB domain-containing protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_coex_sep16_scaffold_33_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

11499..14246
DNA (2748bp) protein (916aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q022Y8_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ83958.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_33_12
Pseudomonas taeanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14378..14941)
DNA (564bp) protein (188aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3HDJ3_PSEAC
Transporter {ECO:0000313|EMBL:KFX70791.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taeanensis MS-3.;"
transport-associated
PLM3_60_coex_sep16_scaffold_33_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(15041..17581)
DNA (2541bp) protein (847aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000379CBFA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17868..20282
DNA (2415bp) protein (805aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037A476A
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_15

Not on your lists

20416..20838
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Rhodovulum sp. PH10 RepID=J5PJ64_9RHOB
Marine sediment metagenome DNA, contig: S01H1_S30031 {ECO:0000313|EMBL:GAG39958.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
class I peptide chain release factor
PLM3_60_coex_sep16_scaffold_33_16
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20844..21845)
DNA (1002bp) protein (334aa)
von Willebrand factor type A Tax=uncultured bacterium RepID=L7Y542_9BACT
VWFA-related domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_33_17
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

21996..22556
DNA (561bp) protein (187aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CW8_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_33_18
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

22568..23458
DNA (891bp) protein (297aa)
Metallophosphoesterase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02CW9_SOLUE
metallophosphoesterase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_33_19
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(23455..24756)
DNA (1302bp) protein (434aa)
Di-/tripeptidase Tax=Microvirga sp. WSM3557 RepID=I4Z2F5_9RHIZ
aminoacyl-histidine dipeptidase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_33_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24753..26369)
DNA (1617bp) protein (539aa)
Uncharacterized protein Tax=Asticcacaulis benevestitus DSM 16100 = ATCC BAA-896 RepID=V4PFV3_9CAUL
TPR repeat-containing protein
TPR repeat-containing protein {ECO:0000313|EMBL:AHG89232.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_60_coex_sep16_scaffold_33_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

26458..26895
DNA (438bp) protein (146aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_22
Granulicella tundricola, Granulicella, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(26897..29959)
DNA (3063bp) protein (1021aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003661345
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADW69933.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Granulicella tundricola (strain ATCC BAA-1859 / DSM 23138 / MP5ACTX9).;"
PLM3_60_coex_sep16_scaffold_33_23
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

30017..31426
DNA (1410bp) protein (470aa)
argininosuccinate synthase (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
argG; argininosuccinate synthase (EC:6.3.4.5)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_24
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(31459..34494)
DNA (3036bp) protein (1012aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000382B3A2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_33_25
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34647..37400
DNA (2754bp) protein (918aa)
serine/threonine protein kinase Tax=Nevskia ramosa RepID=UPI0003B321CC
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:AFC84749.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
PLM3_60_coex_sep16_scaffold_33_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

37599..37898
DNA (300bp) protein (100aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

38236..39468
DNA (1233bp) protein (411aa)
putative amino acid permease; K03759 arginine:agmatine antiporter bin=CNBR_ACIDO species=Pseudomonas alcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
amino acid permease
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_33_28
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

39613..43896
DNA (4284bp) protein (1428aa)
DEAD/H associated domain protein Tax=Methylosinus trichosporium OB3b RepID=D5QN46_METTR
putative ATP-dependent DNA helicase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_coex_sep16_scaffold_33_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(43903..45264)
DNA (1362bp) protein (454aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-)
ATP-dependent RNA helicase RhlE Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE59_GEMAT
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_33_30
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

45403..46245
DNA (843bp) protein (281aa)
sugar phosphate isomerase Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B539F1
Xylose isomerase domain-containing protein TIM barrel
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG93149.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Displaying items 1-30 of 60 in total

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