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PLM3_60_coex_sep16_scaffold_68

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_68_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1..249
DNA (249bp) protein (83aa)
phosphohydrolase Tax=Thermodesulfatator atlanticus RepID=UPI0003B7B84F
metal dependent phosphohydrolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_68_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

274..1593
DNA (1320bp) protein (440aa)
hypothetical protein bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_68_3
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1920..2582
DNA (663bp) protein (221aa)
hypothetical protein Tax=unclassified Verrucomicrobia (miscellaneous) RepID=UPI00037F33C6
sigma-54 dependent DNA-binding response regulator FleR
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_68_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(2589..4274)
DNA (1686bp) protein (562aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_68_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(4274..5056)
DNA (783bp) protein (261aa)
Putative ABC transporter ATP-binding protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_68_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(5023..6651)
DNA (1629bp) protein (543aa)
Transglutaminase-like protein bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transglutaminase domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3_60_coex_sep16_scaffold_68_7
unknown

Not on your lists

comp(6854..7501)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_68_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

7698..9710
DNA (2013bp) protein (671aa)
peptidase, m13 (neprilysin) family (EC:3.4.24.-)
Peptidase M13 family protein Tax=Janthinobacterium sp. HH01 RepID=L9PJR8_9BURK
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_68_9
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(9730..9915)
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_68_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(9990..10706)
DNA (717bp) protein (239aa)
acireductone synthase (EC:3.1.3.77)
Enolase-phosphatase E1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TUQ5_9CYAN
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_coex_sep16_scaffold_68_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(10710..11279)
DNA (570bp) protein (190aa)
Acireductone dioxygenase Tax=Leptolyngbya sp. PCC 6406 RepID=L8LFR6_9CYAN
Acireductone dioxygenase ARD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_coex_sep16_scaffold_68_12
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(11425..12090)
DNA (666bp) protein (222aa)
Methylthioribulose-1-phosphate dehydratase Tax=Blastopirellula marina DSM 3645 RepID=A3ZQM9_9PLAN
methylthioribulose-1-phosphate dehydratase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_coex_sep16_scaffold_68_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12200..13021
DNA (822bp) protein (274aa)
RNA methylase bin=CNBR_ACIDO species=Chelatococcus sp. GW1 genus=Chelatococcus taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RNA methylase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_68_14
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13075..14328
DNA (1254bp) protein (418aa)
Uncharacterized protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAT9_GEMAT
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_68_15
unknown

Not on your lists

comp(14318..14584)
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_68_16
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14698..15303
DNA (606bp) protein (202aa)
hypothetical protein Tax=Methylobacterium sp. 88A RepID=UPI00037731B2
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_coex_sep16_scaffold_68_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15278..15616
DNA (339bp) protein (113aa)
hypothetical protein Tax=Methylobacterium sp. 88A RepID=UPI00037731B2
FMN-dependent alpha-hydroxy acid dehydrogenase
FMN-dependent alpha-hydroxy acid dehydrogenase {ECO:0000313|EMBL:ABJ82631.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_68_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(15668..18379)
DNA (2712bp) protein (904aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037EDD11
permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_68_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(18379..18729)
DNA (351bp) protein (117aa)
Transcriptional regulator PadR-like family protein Tax=uncultured bacterium 70 RepID=E3T6J0_9BACT
PadR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_68_20
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(18832..19659)
DNA (828bp) protein (276aa)
Gll2427 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NHV8_GLOVI
hypothetical protein
Gll2427 protein {ECO:0000313|EMBL:BAC90368.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3_60_coex_sep16_scaffold_68_21
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19656..20135)
DNA (480bp) protein (160aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U5X4_MYXSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGC43503.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
PLM3_60_coex_sep16_scaffold_68_22
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(20193..20855)
DNA (663bp) protein (221aa)
hypothetical protein Tax=Nocardiopsis baichengensis RepID=UPI000349D473
HAD family hydrolase
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:ABJ85418.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_68_23
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(20998..22008)
DNA (1011bp) protein (337aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Cyanothece sp. (strain PCC 7822) RepID=E0U6L9_CYAP2
RNA polymerase sigma factor, sigma-70 family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_68_24
Burkholderia sp. CCGE1003, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22005..22850)
DNA (846bp) protein (282aa)
Short-chain dehydrogenase/reductase SDR Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T5J2_BURSG
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADN57358.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1003).;"
PLM3_60_coex_sep16_scaffold_68_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

22872..23207
DNA (336bp) protein (112aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003789FD2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_68_trna_1
unknown

Not on your lists

23234..23306
DNA (73bp)
transferRNA Cys
PLM3_60_coex_sep16_scaffold_68_26
Paenibacillus sp. FSL P4-0081, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23393..24250
DNA (858bp) protein (286aa)
hypothetical protein Tax=Flavobacterium rivuli RepID=UPI0003770FD4
glycoside hydrolase family 5
Glycoside hydrolase family 5 {ECO:0000313|EMBL:AIQ31305.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL P4-0081.;"
PLM3_60_coex_sep16_scaffold_68_27
Chthonomonas calidirosea, Chthonomonas, Chthonomonadales, Chthonomonadetes, Armatimonadetes, Bacteria

Not on your lists

24255..25304
DNA (1050bp) protein (350aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14)
Threonine dehydrogenase and related Zn-dependent dehydrogenases {ECO:0000313|EMBL:CCW35998.1}; EC=1.1.1.14 {ECO:0000313|EMBL:CCW35998.1};; species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;"
Threonine dehydrogenase and related Zn-dependent dehydrogenases Tax=Chthonomonas calidirosea T49 RepID=S0EZ60_9BACT
PLM3_60_coex_sep16_scaffold_68_28
R_NC10_66_22, NC10, Bacteria

Not on your lists

25403..26725
DNA (1323bp) protein (441aa)
Putative oxidoreductase with FAD/NAD(P)-binding domain Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHW4_9BACT
oxidoreductase with FAD/NAD(P)-binding domain
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_68_29
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

26722..28323
DNA (1602bp) protein (534aa)
Putative transporter fused subunits of ABC superfamily: ATP-binding components Tax=Candidatus Methylomirabilis oxyfera RepID=D5MHW6_9BACT
ybiT; transporter fused subunits of ABC superfamily: ATP-binding components
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 1-30 of 69 in total

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