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PLM3_60_coex_sep16_scaffold_72

Search features with annotation key words

Displaying items 1-30 of 115 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_72_1
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216..656)
DNA (441bp) protein (147aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_60_coex_sep16_scaffold_72_2
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(995..1819)
DNA (825bp) protein (275aa)
Periplasmic binding protein Tax=Nitrospina gracilis 3/211 RepID=M1ZAV1_9BACT
periplasmic-binding protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_coex_sep16_scaffold_72_3
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2066..4684
DNA (2619bp) protein (873aa)
CHU large protein; candidate b-glycosidase, glycoside hydrolase family 8 protein Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11R64_CYTH3
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
PLM3_60_coex_sep16_scaffold_72_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

4987..5532
DNA (546bp) protein (182aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_5
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5591..6613
DNA (1023bp) protein (341aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NST2_GRAMM
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(6671..7300)
DNA (630bp) protein (210aa)
Putative Peptidase S16, lon-like Tax=Candidatus Nitrospira defluvii RepID=D8PAN4_9BACT
putative peptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(7316..8596)
DNA (1281bp) protein (427aa)
von Willebrand factor, type A; K07114 uncharacterized protein bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
von Willebrand factor A
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8670..10217)
DNA (1548bp) protein (516aa)
magnesium protoporphyrin chelatase; K03405 magnesium chelatase subunit I [EC:6.6.1.1] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
magnesium protoporphyrin chelatase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_9
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10249..11118
DNA (870bp) protein (290aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] bin=CNBR_ACIDO species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
glycerophosphoryl diester phosphodiesterase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_10
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11087..12823)
DNA (1737bp) protein (579aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MW39_CORCM
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_72_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

13127..15802
DNA (2676bp) protein (892aa)
2-oxo-acid dehydrogenase E1 subunit, homodimeric type; K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] bin=bin1_lowGC species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
2-oxo-acid dehydrogenase E1 subunit, homodimeric type
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15872..17206
DNA (1335bp) protein (445aa)
dehydrogenase; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

17325..18785
DNA (1461bp) protein (487aa)
dihydrolipoamide dehydrogenase; K00382 dihydrolipoamide dehydrogenase [EC:1.8.1.4] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
dihydrolipoamide dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_14
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(18842..19288)
DNA (447bp) protein (149aa)
Uracil-DNA glycosylase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LFM3_CHLTF
uracil-DNA glycosylase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_72_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(19526..20449)
DNA (924bp) protein (308aa)
lipA; lipoyl synthase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
lipA; lipoyl synthase (EC:2.8.1.8)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_16
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20648..21343
DNA (696bp) protein (232aa)
beta-lactamase-like bin=bin3_NC10 tax=bin3_NC10 organism_group=NC10
beta-lactamase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_17
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

21383..21718
DNA (336bp) protein (112aa)
Gll1201 protein Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
hypothetical protein
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
PLM3_60_coex_sep16_scaffold_72_18
unknown

Not on your lists

22280..22681
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_72_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

23362..24201
DNA (840bp) protein (280aa)
prephenate dehydratase (EC:4.2.1.51)
Putative uncharacterized protein Tax=Picea sitchensis RepID=B8LQ85_PICSI
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3_60_coex_sep16_scaffold_72_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24324..25928
DNA (1605bp) protein (535aa)
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9); K01687 dihydroxy-acid dehydratase [EC:4.2.1.9] bin=RBG_19FT_COMBO_GAL15_69_19 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_72_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

26068..27786
DNA (1719bp) protein (573aa)
acetolactate synthase, large subunit, biosynthetic type; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
acetolactate synthase large subunit
PLM3_60_coex_sep16_scaffold_72_22
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

27935..28486
DNA (552bp) protein (184aa)
ilvN; acetolactate synthase (EC:2.2.1.6); K01653 acetolactate synthase I/III small subunit [EC:2.2.1.6] bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
acetolactate synthase small subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_72_23
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

28591..29631
DNA (1041bp) protein (347aa)
ketol-acid reductoisomerase; K00053 ketol-acid reductoisomerase [EC:1.1.1.86] bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_72_24
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(29707..30453)
DNA (747bp) protein (249aa)
Shikimate kinase Tax=Sorangium cellulosum (strain So ce56) RepID=A9EZZ7_SORC5
anaerobic benzoate catabolism transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_25
unknown

Not on your lists

30662..30850
DNA (189bp) protein (63aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_72_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

31008..32669
DNA (1662bp) protein (554aa)
crotonase (EC:4.2.1.17)
Crotonase Tax=Sorangium cellulosum So0157-2 RepID=S4XRA8_SORCE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

32755..34182
DNA (1428bp) protein (476aa)
Benzoyl-CoA oxygenase Tax=Sorangium cellulosum So0157-2 RepID=S4XPE9_SORCE
benzoyl-CoA oxygenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_28
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

34393..35778
DNA (1386bp) protein (462aa)
Aldehyde Dehydrogenase Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ64_9BACT
NAD-dependent aldehyde dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_29
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(36013..36795)
DNA (783bp) protein (261aa)
hypothetical protein Tax=Salsuginibacillus kocurii RepID=UPI00037AED2E
enoyl-CoA hydratase/isomerase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_72_30
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(36940..37749)
DNA (810bp) protein (270aa)
3-hydroxyacyl-CoA dehydrogenase Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KA54_9FIRM
3-hydroxyacyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
Displaying items 1-30 of 115 in total

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