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PLM3_60_coex_sep16_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_77_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(104..1324)
DNA (1221bp) protein (407aa)
Heme/copper-type cytochrome/quinol oxidase, subunit 1 Tax=Methylomicrobium album BG8 RepID=H8GR54_METAL
cytochrome c oxidase subunit I
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_60_coex_sep16_scaffold_77_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1324..1845)
DNA (522bp) protein (174aa)
hypothetical protein Tax=Brevibacillus sp. phR RepID=UPI00030A854C
cytochrome B5
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_coex_sep16_scaffold_77_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(1842..1982)
DNA (141bp) protein (47aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_60_coex_sep16_scaffold_77_4
unknown

Not on your lists

2384..3346
DNA (963bp) protein (321aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_77_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3644..4084)
DNA (441bp) protein (147aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI0003615544
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein
Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
PLM3_60_coex_sep16_scaffold_77_6
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

4284..4673
DNA (390bp) protein (130aa)
peptidoglycan-binding LysM bin=CNBR_ACIDO species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_77_7
unknown

Not on your lists

5147..5569
DNA (423bp) protein (141aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_77_8
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5837..7123
DNA (1287bp) protein (429aa)
hypothetical protein Tax=Actinopolymorpha alba RepID=UPI00037E4AC8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH39383.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6).;"
PLM3_60_coex_sep16_scaffold_77_9
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7151..7540
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Natronococcus occultus SP4 RepID=L0K5L3_9EURY
hypothetical protein
Tax=RBG_16_RIF_CHLX_72_14_curated
PLM3_60_coex_sep16_scaffold_77_10
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7543..7932
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Pontibacter sp. BAB1700 RepID=J0LM09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EJF10443.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_77_11
unknown

Not on your lists

comp(8127..8462)
DNA (336bp) protein (112aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_77_12
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8468..8872)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Burkholderia sp. WSM4176 RepID=UPI000361E384
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ADO68241.1}; Transcriptional regulatory protein PadR {ECO:0000313|EMBL:EAU65963.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_60_coex_sep16_scaffold_77_13
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8947..9942
DNA (996bp) protein (332aa)
Aldo/keto reductase Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08ZP0_STIAD
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:EAU65924.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
PLM3_60_coex_sep16_scaffold_77_14
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10033..10839
DNA (807bp) protein (269aa)
zinc/iron permease; K07238 zinc transporter, ZIP family bin=CNBR_ACIDO species=Spirochaeta thermophila genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=GWE2_Bacteroidetes_42_39_curated
PLM3_60_coex_sep16_scaffold_77_15
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(10882..12129)
DNA (1248bp) protein (416aa)
Hypothetical membrane protein Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEG9_GEMAT
hypothetical membrane protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_77_16
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

12371..13054
DNA (684bp) protein (228aa)
CBS domain containing protein bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
CBS domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_77_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

13375..13863
DNA (489bp) protein (163aa)
NADP oxidoreductase, coenzyme F420-dependent; K06988 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative NADP oxidoreductase, coenzyme F420-dependent
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
PLM3_60_coex_sep16_scaffold_77_18
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists

13860..14012
DNA (153bp) protein (51aa)
NADP oxidoreductase, coenzyme F420-dependent; K06988 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Rudaea cellulosilytica genus=Rudaea taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative dinucleotide-binding enzyme
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_60_coex_sep16_scaffold_77_19
Pseudomonas resinovorans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14020..14196
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AC98_PSERE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAN46227.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas resinovorans NBRC 106553.;"
PLM3_60_coex_sep16_scaffold_77_20
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

14236..14694
DNA (459bp) protein (153aa)
Cytochrome c family protein, putative Tax=Caenispirillum salinarum AK4 RepID=K9H202_9PROT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_77_21
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(14776..15138)
DNA (363bp) protein (121aa)
Putative uncharacterized protein bin=GWB2_Ignavibacteria_35_12 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein
Tax=CG_Anaero_02
PLM3_60_coex_sep16_scaffold_77_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

15437..16894
DNA (1458bp) protein (486aa)
Monooxygenase FAD-binding protein Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EIX5_CORAD
FAD-binding monooxygenase protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_77_23
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17006..17944)
DNA (939bp) protein (313aa)
Dihydroorotate dehydrogenase family protein Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N1B4_ANATU
Uncharacterized protein {ECO:0000313|EMBL:CDH43480.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
dihydroorotate dehydrogenase family protein
PLM3_60_coex_sep16_scaffold_77_24
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17962..21588)
DNA (3627bp) protein (1209aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
pyruvate-flavodoxin oxidoreductase Tax=Methylococcus capsulatus RepID=UPI0002F74313
pyruvate ferredoxin/flavodoxin oxidoreductase
PLM3_60_coex_sep16_scaffold_77_25
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21623..23215)
DNA (1593bp) protein (531aa)
Pyridine nucleotide-disulphide oxidoreductase family protein Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60AS4_METCA
Pyridine nucleotide-disulphide oxidoreductase family protein {ECO:0000313|EMBL:CDH43478.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contendobacter odensis Run_B_J11.;"
glutamate synthase
PLM3_60_coex_sep16_scaffold_77_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

23528..23752
DNA (225bp) protein (75aa)
Nitrogen-fixing NifU domain protein bin=GWC2_Proteo_65_14_Ab886 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
NifU domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3_60_coex_sep16_scaffold_77_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23770..24885
DNA (1116bp) protein (372aa)
Two-component response regulator bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
two component sigma54 specific Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_77_28
unknown

Not on your lists

24886..25377
DNA (492bp) protein (164aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_77_29
unknown

Not on your lists

25433..25606
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_77_30
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(25775..26230)
DNA (456bp) protein (152aa)
hypothetical protein Tax=Brachybacterium squillarum RepID=UPI0002629AF3
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
Displaying items 1-30 of 75 in total

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