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PLM3_60_coex_sep16_scaffold_117

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_117_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

136..834
DNA (699bp) protein (233aa)
CRP/FNR family transcriptional regulator bin=CNBR_ACIDO species=Desulfobacter postgatei genus=Desulfobacter taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Crp/FNR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_117_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(847..1413)
DNA (567bp) protein (189aa)
id=12557744 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
PLM3_60_coex_sep16_scaffold_117_3
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(1410..2951)
DNA (1542bp) protein (514aa)
methyl-viologen-reducing hydrogenase subunit delta bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome b/b6-like
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_60_coex_sep16_scaffold_117_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3102..3272
DNA (171bp) protein (57aa)
seg 29..39 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_coex_sep16_scaffold_117_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

3279..3866
DNA (588bp) protein (196aa)
cyoA; heme/copper-type cytochrome/quinol oxidase subunit 2; K02275 cytochrome c oxidase subunit II [EC:1.9.3.1] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cyoA; heme/copper-type cytochrome/quinol oxidase subunit 2
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_coex_sep16_scaffold_117_6
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

3863..5632
DNA (1770bp) protein (590aa)
cytochrome c oxidase subunit I bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cyoB; heme/copper-type cytochrome/quinol oxidase subunit 1
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
PLM3_60_coex_sep16_scaffold_117_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5629..6507
DNA (879bp) protein (293aa)
electron transport protein SCO1/SenC; K07152 bin=CNBR_ACIDO species=Oceanicaulis sp. HTCC2633 genus=Oceanicaulis taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
electron transporter SCO1/SenC
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_coex_sep16_scaffold_117_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

6763..7356
DNA (594bp) protein (198aa)
hypothetical protein bin=CNBR_ACIDO species=Rhodopirellula sallentina genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_117_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7320..10019
DNA (2700bp) protein (900aa)
P-type ATPase, translocating Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6PYX1_9FIRM
P-type HAD superfamily ATPase
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_117_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(10086..10775)
DNA (690bp) protein (230aa)
id=12556446 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_117_11
unknown

Not on your lists

comp(10939..11310)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_117_12
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(11536..12516)
DNA (981bp) protein (327aa)
Universal stress protein UspA-like protein Tax=Haloterrigena limicola JCM 13563 RepID=M0CNC0_9EURY
UspA domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_117_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12535..13896)
DNA (1362bp) protein (454aa)
sigma-54 dependent DNA-binding response regulator bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Fis family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
PLM3_60_coex_sep16_scaffold_117_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

14096..14590
DNA (495bp) protein (165aa)
Universal stress protein Tax=Prosthecochloris vibrioformis (strain DSM 265) RepID=A4SEZ6_PROVI
UspA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_coex_sep16_scaffold_117_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14991..15431
DNA (441bp) protein (147aa)
CBS Tax=Bacteria RepID=A6CH31_9PLAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_117_16
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15543..15695
DNA (153bp) protein (51aa)
Uncharacterized protein Tax=Afipia sp. 1NLS2 RepID=D6V637_9BRAD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
PLM3_60_coex_sep16_scaffold_117_17
unknown

Not on your lists

15818..16198
DNA (381bp) protein (127aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_117_18
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

16409..16951
DNA (543bp) protein (181aa)
Uncharacterized protein Tax=uncultured bacterium RepID=L7Y6P6_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_117_19
unknown

Not on your lists

17030..17641
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_117_20
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17644..18378)
DNA (735bp) protein (245aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003614DF9
Putative transcriptional regulator {ECO:0000313|EMBL:EIG63833.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
HxlR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_117_21
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18499..19746
DNA (1248bp) protein (416aa)
hypothetical protein Tax=Actinoplanes globisporus RepID=UPI00036F0A30
PA-phosphatase-like phosphoesterase
Phosphoesterase, PA-phosphatase related protein {ECO:0000313|EMBL:ABB74996.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
PLM3_60_coex_sep16_scaffold_117_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(19863..20723)
DNA (861bp) protein (287aa)
pirin Tax=Rhizobium leguminosarum RepID=UPI0003785BB6
pirin
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_117_23
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20976..21716
DNA (741bp) protein (247aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037BF35D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL58124.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
PLM3_60_coex_sep16_scaffold_117_24
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21713..22192
DNA (480bp) protein (160aa)
Transcriptional regulator Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ39_SINAD
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA31357.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_60_coex_sep16_scaffold_117_25
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22216..24252
DNA (2037bp) protein (679aa)
Putative hydrolase, CocE/NonD family Tax=Caulobacter sp. AP07 RepID=J2G5N3_9CAUL
Putative hydrolase, CocE/NonD family {ECO:0000313|EMBL:EJL24995.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
peptidase S15
PLM3_60_coex_sep16_scaffold_117_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(24358..24648)
DNA (291bp) protein (97aa)
Fe-S protein, radical SAM family Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISQ8_KORVE
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_117_27
unknown

Not on your lists

comp(24988..25713)
DNA (726bp) protein (242aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_117_28
RIFOXYA2_FULL_Elusimicrobia_39_19_curated, Elusimicrobia, Bacteria

Not on your lists

25751..26704
DNA (954bp) protein (318aa)
sulfatase Tax=Streptomyces scabrisporus RepID=UPI000380D072
sulfatase
Tax=RIFOXYA2_FULL_Elusimicrobia_39_19_curated
PLM3_60_coex_sep16_scaffold_117_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(26723..28099)
DNA (1377bp) protein (459aa)
acetylglucosamine-6-sulfatase Tax=Verrucomicrobium spinosum RepID=UPI0001745D5E
arylsulfatase A family protein
Arylsulfatase A family protein {ECO:0000313|EMBL:AGA24641.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_60_coex_sep16_scaffold_117_30
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28338..28781
DNA (444bp) protein (148aa)
Beta-lactamase Tax=Roseiflexus sp. (strain RS-1) RepID=A5UWZ5_ROSS1
Beta-lactamase {ECO:0000313|EMBL:GAN78440.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
beta-lactamase
Displaying items 1-30 of 74 in total

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