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PLM3_60_coex_sep16_scaffold_3792

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3792_1
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

2..2062
DNA (2061bp) protein (687aa)
Uncharacterized protein Tax=Clostridium hathewayi 12489931 RepID=N9XR25_9CLOT
xdh; xanthine dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_coex_sep16_scaffold_3792_2
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

2192..2569
DNA (378bp) protein (126aa)
hypothetical protein Tax=Azoarcus toluclasticus RepID=UPI00036EF67E
globin
Globin {ECO:0000313|EMBL:ABJ88703.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_3792_3
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2830..3360
DNA (531bp) protein (177aa)
Alpha/beta hydrolase fold protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_3792_4
unknown

Not on your lists

3484..3585
DNA (102bp) protein (34aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3792_5
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4077..4475
DNA (399bp) protein (133aa)
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_3792_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4553..5362
DNA (810bp) protein (270aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3792_7
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

5468..6259
DNA (792bp) protein (264aa)
glucose 1-dehydrogenase (EC:1.1.1.47)
hypothetical protein Tax=candidate division OP9 bacterium OP9-77CS RepID=UPI00035E5AE8
Tax=CG_Micra_03
PLM3_60_coex_sep16_scaffold_3792_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6307..6996)
DNA (690bp) protein (230aa)
Peptidase S16 lon domain protein Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QIZ5_BRESC
peptidase S16
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_3792_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7146..7577
DNA (432bp) protein (144aa)
Uncharacterized protein Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B2I6_STRRD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3792_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7583..8230
DNA (648bp) protein (216aa)
UPF0301 protein DAMO_1713 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3792_11
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8276..8626
DNA (351bp) protein (117aa)
Putative uncharacterized protein Tax=uncultured marine bacterium MedDCM-OCT-S04-C448 RepID=D6PD31_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3792_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8668..9600
DNA (933bp) protein (311aa)
Putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46ML3_CUPPJ
putative ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3792_13
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9840..10418
DNA (579bp) protein (193aa)
Sigma factor bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
RNA polymerase, sigma-24 subunit, RpoE
Tax=RBG_16_Deltaproteobacteria_54_18_curated
PLM3_60_coex_sep16_scaffold_3792_14
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

10415..11566
DNA (1152bp) protein (384aa)
Putative uncharacterized protein bin=GWF2_Methylomirabilis_70_14 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_coex_sep16_scaffold_3792_15

Not on your lists

11653..12966
DNA (1314bp) protein (438aa)
Putative uncharacterized protein Tax=uncultured archaeon RepID=D1JBI0_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39460.1}; species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3792_16
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13042..13530)
DNA (489bp) protein (163aa)
Putative NUDIX domain protein bin=GWD2_Deltaproteobacteria_55_8 species=uncultured marine microorganism HF4000_ANIW93N21 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
NUDIX hydrolase
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_60_coex_sep16_scaffold_3792_17
Streptomyces hygroscopicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13560..14738)
DNA (1179bp) protein (393aa)
Metal-dependent hydrolase Tax=Streptomyces hygroscopicus subsp. jinggangensis (strain 5008) RepID=H2K6B8_STRHJ
metal-dependent hydrolase
Metal-dependent hydrolase {ECO:0000313|EMBL:AEY85442.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces hygroscopicus subsp. jinggangensis (strain 5008).;"
PLM3_60_coex_sep16_scaffold_3792_18
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14887..15369)
DNA (483bp) protein (161aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Tribolium castaneum genus=Tribolium taxon_order=Coleoptera taxon_class=Insecta phylum=Arthropoda tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_60_coex_sep16_scaffold_3792_19
actinobacterium acAcidi, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15648..16244
DNA (597bp) protein (199aa)
hypothetical protein Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002F1291D
Uncharacterized protein {ECO:0000313|EMBL:KGA10290.1}; species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;"
glpC; hypothetical protein
PLM3_60_coex_sep16_scaffold_3792_20
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

16220..16867
DNA (648bp) protein (216aa)
glpC; ferredoxin bin=bin7_NC10_sister species=Sulfobacillus thermosulfidooxidans genus=Sulfobacillus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Fe-S oxidoreductase
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_60_coex_sep16_scaffold_3792_21
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16914..17156)
DNA (243bp) protein (81aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNS2_HALO1
Uncharacterized protein {ECO:0000313|EMBL:KIG14414.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_3792_22
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17153..17512)
DNA (360bp) protein (120aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LNS2_HALO1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACY16977.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3_60_coex_sep16_scaffold_3792_23
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17707..19059)
DNA (1353bp) protein (451aa)
Glutathione-disulfide reductase, plant Tax=Pseudomonas sp. GM50 RepID=J2S6B7_9PSED
gor; Glutathione reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_3792_24
GWD2_Deltaproteobacteria_55_8_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19339..20613
DNA (1275bp) protein (425aa)
MFS transporter bin=GWD2_Deltaproteobacteria_55_8 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
major facilitator transporter
Tax=GWD2_Deltaproteobacteria_55_8_curated
PLM3_60_coex_sep16_scaffold_3792_25
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20638..21624
DNA (987bp) protein (329aa)
plasmid stablization protein ParB Tax=Myxococcus xanthus RepID=UPI000319BB75
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_3792_26
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21772..22905)
DNA (1134bp) protein (378aa)
Rieske (2Fe-2S) domain protein Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T3T9_MYCVP
Rieske (2Fe-2S) domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
PLM3_60_coex_sep16_scaffold_3792_27
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22971..23912)
DNA (942bp) protein (314aa)
4,5-dihydroxyphthalate decarboxylase bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia xenovorans genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_3792_28
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24014..24988)
DNA (975bp) protein (325aa)
NMT1/THI5-like domain-containing protein bin=GWD2_Deltaproteobacteria_55_8 species=Brenneria sp. EniD312 genus=Brenneria taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3792_29
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25008..25856)
DNA (849bp) protein (283aa)
2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
2-hydroxy-3-oxopropionate reductase {ECO:0000313|EMBL:ABQ70619.1}; EC=1.1.1.60 {ECO:0000313|EMBL:ABQ70619.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;"
2-hydroxy-3-oxopropionate reductase Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VEA3_SPHWW
Displaying 29 items

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