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PLM3_60_coex_sep16_scaffold_3941

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3941_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1..360
DNA (360bp) protein (120aa)
Phosphate/sulphate permease bin=GWA2_Methylomirabilis_73_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
phosphate transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_3941_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(398..724)
DNA (327bp) protein (109aa)
Recombination protein RecR Tax=Clostridium sp. CAG:492 RepID=R5ZA73_9CLOT
recR; recombination protein RecR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3941_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(721..936)
DNA (216bp) protein (72aa)
Recombination protein RecR Tax=Oscillatoria acuminata PCC 6304 RepID=K9TLY7_9CYAN
DNA replication and repair protein RecR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_3941_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1041..1364)
DNA (324bp) protein (108aa)
Nucleoid-associated protein SYNAS_00790 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_3941_5
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1409..3121)
DNA (1713bp) protein (571aa)
DNA polymerase III, gamma and tau subunits Tax=Geobacter sulfurreducens RepID=D7AM05_GEOSK
dnaX; DNA polymerase III subunits gamma and tau
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_3941_trna_4
unknown

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comp(3403..3491)
DNA (89bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_3941_6
unknown

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3943..4230
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3941_trna_3
unknown

Not on your lists

comp(4439..4527)
DNA (89bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_3941_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4494..5003)
DNA (510bp) protein (170aa)
adenosine deaminase Tax=Laceyella sacchari RepID=UPI0003B36438
tRNA-specific adenosine-34 deaminase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_3941_8
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5167..5985)
DNA (819bp) protein (273aa)
Response regulator receiver protein bin=GWD2_Deltaproteobacteria_55_8 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
response regulator receiver protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_3941_9
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6488..6901)
DNA (414bp) protein (138aa)
Two component transcriptional regulator, winged helix family Tax=Thermoanaerobacter thermohydrosulfuricus WC1 RepID=M8CVL5_THETY
response regulator receiver
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_60_coex_sep16_scaffold_3941_trna_2
unknown

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comp(7447..7520)
DNA (74bp)
transferRNA Arg
PLM3_60_coex_sep16_scaffold_3941_trna_1
unknown

Not on your lists

comp(7599..7686)
DNA (88bp)
transferRNA Ser
PLM3_60_coex_sep16_scaffold_3941_10
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7947..8852)
DNA (906bp) protein (302aa)
Iron complex ABC transporter substrate-binding protein bin=GWD2_Deltaproteobacteria_55_8 species=Phascolarctobacterium succinatutens genus=Phascolarctobacterium taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
family 1 extracellular solute-binding protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 14 items

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