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PLM3_60_coex_sep16_scaffold_10006

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10006_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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3..362
DNA (360bp) protein (120aa)
UPI0002776920 related cluster bin=GWD2_Deltaproteobacteria_55_8 species=Marinobacter sp. BSs20148 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10006_2
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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570..1715
DNA (1146bp) protein (382aa)
Rieske (2Fe-2S) iron-sulfur domain protein Tax=Burkholderia sp. YI23 RepID=G8MND6_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ETW96846.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
rieske 2Fe-2S iron-sulfur domain protein
PLM3_60_coex_sep16_scaffold_10006_3
R_NC10_66_22, NC10, Bacteria

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comp(1736..2596)
DNA (861bp) protein (287aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
PLM3_60_coex_sep16_scaffold_10006_4
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2652..3611)
DNA (960bp) protein (320aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
dihydrodipicolinate synthetase family protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin8_Chloro organism_group=Chloroflexi
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10006_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4313..5221
DNA (909bp) protein (303aa)
Rhodanese-like protein
Sulfurtransferase bin=GWF2_Methylomirabilis_70_14 species=Ralstonia sp. PBA genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10006_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5222..5788)
DNA (567bp) protein (189aa)
Cysteine dioxygenase type I bin=GWA2_Methylomirabilis_73_35 species=Bacillus megaterium genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10006_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5798..6247)
DNA (450bp) protein (150aa)
UspA domain protein bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Haloferax taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
UspA domain-containing protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_10006_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6294..7346)
DNA (1053bp) protein (351aa)
Amidohydrolase family protein bin=GWD2_Deltaproteobacteria_55_8 species=Microcoleus sp. PCC 7113 genus=Microcoleus taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
TIM-barrel fold metal-dependent hydrolase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_10006_9
Pseudomonas sp. GM48, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7480..8121)
DNA (642bp) protein (214aa)
Methyltransferase family protein Tax=Pseudomonas sp. GM48 RepID=J2SGQ2_9PSED
Methyltransferase family protein {ECO:0000313|EMBL:EJM60919.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM48.;"
methyltransferase
PLM3_60_coex_sep16_scaffold_10006_10
unknown

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comp(8184..8777)
DNA (594bp) protein (198aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10006_11
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8863..9234)
DNA (372bp) protein (124aa)
D-isomer specific 2-hydroxyacid dehydrogenase family protein bin=GWD2_Deltaproteobacteria_55_8 species=Mycobacterium avium genus=Mycobacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
2-hydroxyacid dehydrogenase
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
Displaying 11 items

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