ggKbase home page

PLM3_60_coex_sep16_scaffold_10772

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_10772_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

371..1489
DNA (1119bp) protein (373aa)
ABC-type Fe3+ transport system periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Agrobacterium tumefaciens genus=Agrobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Ferric transporter ATP-binding subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10772_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1587..2129
DNA (543bp) protein (181aa)
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10772_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2146..2880
DNA (735bp) protein (245aa)
Conserved uncharacterized protein Tax=uncultured bacterium RepID=C5JAU0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_10772_4
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2965..4224)
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B6615A
sulfatase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM3_60_coex_sep16_scaffold_10772_5
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(4217..4837)
DNA (621bp) protein (207aa)
hypothetical protein Tax=Pontibacter roseus RepID=UPI00038018A8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD04170.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
PLM3_60_coex_sep16_scaffold_10772_6
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5146..6237
DNA (1092bp) protein (364aa)
ABC-type Fe3+ transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_10772_7
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6498..7586
DNA (1089bp) protein (363aa)
ABC-type Fe3+ transport system, periplasmic component bin=GWD2_Deltaproteobacteria_55_8 species=Rhizobium sp. CF080 genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
putative ABC transporter substrate-binding protein
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_10772_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7600..9555
DNA (1956bp) protein (652aa)
Binding-protein-dependent transport systems inner membrane component bin=GWD2_Deltaproteobacteria_55_8 species=Burkholderia sp. YI23 genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
binding-protein-dependent transport systems inner membrane component
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_10772_9
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9861..10145
DNA (285bp) protein (95aa)
hypothetical protein bin=bin9_gal15 species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin9_gal15 organism_group=GAL15
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
PLM3_60_coex_sep16_scaffold_10772_10
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

10225..11016
DNA (792bp) protein (264aa)
Fatty acid hydroxylase Tax=Chthoniobacter flavus Ellin428 RepID=B4D620_9BACT
Fatty acid hydroxylase {ECO:0000313|EMBL:EDY18223.1}; species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
sterol desaturase
PLM3_60_coex_sep16_scaffold_10772_11
unknown

Not on your lists

11342..11584
DNA (243bp) protein (81aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_10772_12
Pseudoalteromonas agarivorans, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11685..12341
DNA (657bp) protein (219aa)
Putative periplasmic protein Tax=Pseudoalteromonas agarivorans S816 RepID=N6VAL1_9GAMM
Putative periplasmic protein {ECO:0000313|EMBL:ENN99363.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas agarivorans S816.;"
PLM3_60_coex_sep16_scaffold_10772_13
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12496..12741
DNA (246bp) protein (82aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 13 items

View Taxonomy