ggKbase home page

PLM3_60_coex_sep16_scaffold_15020

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_15020_1
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96..335)
DNA (240bp) protein (80aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Tax=Desulfovibrio aespoeensis (strain ATCC 700646 / DSM 10631 / Aspo-2) RepID=E6VV34_DESAO
alkyl hydroperoxide reductase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_15020_2
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(384..1211)
DNA (828bp) protein (276aa)
Short-chain dehydrogenase/reductase SDR Tax=Candidatus Nitrosopumilus koreensis AR1 RepID=K0BBP0_9ARCH
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_15020_3
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1320..2228)
DNA (909bp) protein (303aa)
Putative uncharacterized protein bin=GWD2_Deltaproteobacteria_55_8 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_15020_4

Not on your lists

2461..3519
DNA (1059bp) protein (353aa)
Uncharacterized protein Tax=mine drainage metagenome RepID=T1CEE2_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD79923.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_15020_5
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3561..4145
DNA (585bp) protein (195aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YGF4_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29648.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_15020_6
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4142..4300
DNA (159bp) protein (53aa)
Transposase IS4 (Fragment) Tax=mine drainage metagenome RepID=T1A5H2_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF05864.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
PLM3_60_coex_sep16_scaffold_15020_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4413..4793
DNA (381bp) protein (127aa)
Thymidylate synthase complementing protein ThyX bin=GWD2_Deltaproteobacteria_55_8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thymidylate synthase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_15020_8
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4793..5368
DNA (576bp) protein (192aa)
Thymidylate synthase complementing protein ThyX bin=GWD2_Deltaproteobacteria_55_8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thymidylate synthase complementing protein ThyX
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_15020_9
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5344..5937
DNA (594bp) protein (198aa)
Thymidylate synthase complementing protein ThyX bin=GWD2_Deltaproteobacteria_55_8 species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
thymidylate synthase complementing protein ThyX
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_15020_10
unknown

Not on your lists

6071..6184
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying 10 items

View Taxonomy