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PLM3_60_coex_sep16_scaffold_17788

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_17788_1
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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3..476
DNA (474bp) protein (158aa)
BioH bin=GWB2_Deltaproteobacteria_65_81 species=Kurthia sp. 538-KA26 genus=Kurthia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_17788_2
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

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518..1042
DNA (525bp) protein (175aa)
Alpha/beta hydrolase fold protein Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TWN0_9CYAN
alpha/beta fold family hydrolase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
PLM3_60_coex_sep16_scaffold_17788_3
unknown

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1206..1400
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_17788_4
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1694..2023)
DNA (330bp) protein (110aa)
hypothetical protein Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI000368083E
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_17788_5
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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2182..3000
DNA (819bp) protein (273aa)
Naphthoate synthase bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=Rhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Enoyl-CoA hydratase/carnithine racemase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_17788_6
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

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3153..4307
DNA (1155bp) protein (385aa)
Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal bin=GWD2_Deltaproteobacteria_55_8 species=Cupriavidus pinatubonensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
acyl-CoA dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
PLM3_60_coex_sep16_scaffold_17788_7
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4600..5244
DNA (645bp) protein (215aa)
hypothetical protein Tax=Geopsychrobacter electrodiphilus RepID=UPI00036FFF52
exodeoxyribonuclease VII large subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_coex_sep16_scaffold_17788_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5192..5794
DNA (603bp) protein (201aa)
xseA; Exodeoxyribonuclease 7 large subunit (Exodeoxyribonuclease VII large subunit) (Exonuclease VII large subunit) (EC:3.1.11.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
xseA; exodeoxyribonuclease VII large subunit
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
PLM3_60_coex_sep16_scaffold_17788_9
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5796..6719
DNA (924bp) protein (308aa)
Peptidase, M23/M37 family bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
peptidase M23
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_coex_sep16_scaffold_17788_10
RLO_Deltaproteobacteria_60_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6721..6957
DNA (237bp) protein (79aa)
Exodeoxyribonuclease 7 small subunit bin=GWD2_Deltaproteobacteria_55_8 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
exodeoxyribonuclease VII small subunit
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_16_curated
Displaying 10 items

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