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PLM3_60_coex_sep16_scaffold_3355

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_3355_1
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(88..1281)
DNA (1194bp) protein (398aa)
ABC transporter Tax=Frankia sp. BCU110501 RepID=UPI000376DBCA
ABC transporter related protein {ECO:0000313|EMBL:EFC86280.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
ABC transporter-like protein
PLM3_60_coex_sep16_scaffold_3355_2
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(1281..2141)
DNA (861bp) protein (287aa)
ABC transporter Tax=Frankia sp. BCU110501 RepID=UPI000370DA46
ABC-2 type transporter
Transport permease protein {ECO:0000256|RuleBase:RU361157}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
PLM3_60_coex_sep16_scaffold_3355_3
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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2144..3946
DNA (1803bp) protein (601aa)
Uncharacterized protein Tax=Frankia sp. CN3 RepID=G6H4Z7_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABG04145.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_3355_4
unknown

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3943..4110
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3355_5
R_OD1_Uhrbacteria_54_37, Uhrbacteria, Parcubacteria, Bacteria

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4189..4380
DNA (192bp) protein (64aa)
stress-responsive transcriptional regulator bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
pspC; stress-responsive transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_OD1_Uhrbacteria_54_37_curated
PLM3_60_coex_sep16_scaffold_3355_6
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

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comp(4409..5584)
DNA (1176bp) protein (392aa)
Aminotransferase class I and II Tax=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) RepID=C5C034_BEUC1
Glutamate-pyruvate aminotransferase {ECO:0000313|EMBL:KIE53038.1}; species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
class I and II aminotransferase
PLM3_60_coex_sep16_scaffold_3355_7
Micromonospora sp. M42, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(5626..7212)
DNA (1587bp) protein (529aa)
hypothetical protein Tax=Frankia sp. Iso899 RepID=UPI0003B54730
LigA protein {ECO:0000313|EMBL:EWM65660.1}; species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. M42.;"
PLM3_60_coex_sep16_scaffold_3355_8
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

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comp(7248..8078)
DNA (831bp) protein (277aa)
hypothetical protein Tax=Candidatus Microthrix parvicella RepID=UPI00036E0F51
Uncharacterized protein {ECO:0000313|EMBL:CCM61894.1}; species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
family 2 glycosyl transferase
PLM3_60_coex_sep16_scaffold_3355_9
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8285..9130
DNA (846bp) protein (282aa)
glycosyl transferase family 1 Tax=Patulibacter americanus RepID=UPI0003B613C2
hypothetical protein
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM3_60_coex_sep16_scaffold_3355_10
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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9176..10717
DNA (1542bp) protein (514aa)
Glycosyltransferase Tax=Frankia sp. QA3 RepID=I8QV96_9ACTO
Glycosyltransferase {ECO:0000313|EMBL:EIV93989.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
group 1 glycosyl transferase
PLM3_60_coex_sep16_scaffold_3355_11
unknown

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comp(10671..11258)
DNA (588bp) protein (196aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_3355_12
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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11445..12356
DNA (912bp) protein (304aa)
Glycosyl transferase family 2 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYQ4_FRADG
family 2 glycosyl transferase
Glycosyl transferase family 2 {ECO:0000313|EMBL:AEH08561.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_3355_13
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(12383..12574)
DNA (192bp) protein (64aa)
Transmembrane protein Tax=Amycolatopsis mediterranei RepID=G0G653_AMYMS
transmembrane protein
Transmembrane protein {ECO:0000313|EMBL:AEK40857.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
Displaying 13 items

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