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PLM3_60_coex_sep16_scaffold_6393

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6393_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..1294)
DNA (1293bp) protein (431aa)
30S ribosomal protein S1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AYW4_FRADG
RNA binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:AEH09552.1}; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
PLM3_60_coex_sep16_scaffold_6393_2

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1668..2399
DNA (732bp) protein (244aa)
alaS; threonyl/alanyl tRNA synthetase SAD (EC:6.1.1.7)
Threonyl/alanyl tRNA synthetase SAD Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TPD7_9CHLR
Marine sediment metagenome DNA, contig: S01H1_L03034 {ECO:0000313|EMBL:GAF84181.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_coex_sep16_scaffold_6393_3
Scytonema tolypothrichoides, Scytonema, Nostocales, Cyanobacteria, Bacteria

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2396..3052
DNA (657bp) protein (219aa)
NUDIX hydrolase Tax=Geobacillus sp. (strain Y412MC10) RepID=D3E7X2_GEOS4
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:KIJ83618.1}; species="Bacteria; Cyanobacteria; Nostocales; Scytonemataceae; Scytonema.;" source="Scytonema tolypothrichoides VB-61278.;"
NUDIX hydrolase
PLM3_60_coex_sep16_scaffold_6393_4
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

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comp(3089..5824)
DNA (2736bp) protein (912aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase I {ECO:0000313|EMBL:ABK52860.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ABK52860.1};; species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
DNA polymerase I Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTV0_ACIC1
PLM3_60_coex_sep16_scaffold_6393_5
unknown

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comp(5936..6397)
DNA (462bp) protein (154aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6393_6
CSP1_5_NC10, NC10, Bacteria

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comp(6928..7575)
DNA (648bp) protein (216aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
ABC transporter
Tax=CSP1_5_NC10
PLM3_60_coex_sep16_scaffold_6393_7
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(7572..8423)
DNA (852bp) protein (284aa)
Putative branched-chain amino acid ABC transporter ATP-binding protein Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I6Y3_CALAS
putative branched-chain amino acid ABC transporter ATP-binding protein
Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
PLM3_60_coex_sep16_scaffold_6393_8
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(8425..10176)
DNA (1752bp) protein (584aa)
Putative branched chain amino acid transport permease Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WAL1_9ACTO
Putative branched chain amino acid transport permease {ECO:0000313|EMBL:EFL26952.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces himastatinicus ATCC 53653.;"
branched-chain amino acid ABC transporter permease
PLM3_60_coex_sep16_scaffold_6393_9
RLO_Nitrospirae_42_9, Nitrospirae, Bacteria

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comp(10176..11078)
DNA (903bp) protein (301aa)
Putative Amino acid/amide ABC transporter membrane protein 1, HAAT family Tax=Streptomyces viridochromogenes Tue57 RepID=L8P4I9_STRVR
amino acid ABC transporter
Tax=RifCSPlowO2_12_Nitrospirae_42_9_curated
PLM3_60_coex_sep16_scaffold_6393_10
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(11207..12427)
DNA (1221bp) protein (407aa)
Branched-chain amino acid ABC transporter substrate-binding protein Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XRR4_MICPN
branched-chain amino acid ABC transporter substrate-binding protein
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAK37127.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
Displaying 10 items

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